| Entry |
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| Name |
(RefSeq) Pre-mRNA-splicing factor ATP-dependent RNA helicase
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| KO |
| K12815 | pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6] |
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| Organism |
tet Tetrahymena thermophila
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tet00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TTHERM_00372500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:tet03041]
TTHERM_00372500
Enzymes [BR:tet01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TTHERM_00372500
Spliceosome [BR:tet03041]
Complex C
Other components
Step II factors
TTHERM_00372500
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| AA seq |
1126 aa
MSSKDKKTDKRRSRSRSYEKDNSRKSDYSNRSSKNSGSSSYRGSRYDDEQSDYKDKQSQS
SLKDYSRPSKYSQSEKRRERSSRSRSRSNERNDKGSRTSKYNNSYEKGSSSSYTQSTQQS
TNKRDTGTKENPAYKLSSGPVMFVGSKGATLVKKTPLPPSRNAEGNGGDQFKAPAPRGQG
GQTNQYQGYQTSKRQNRNENEWDDYEGKAEQYWYDQDENGNYFDEAEEAIFVGDEQAFRA
KEEQLEMMKQKKQNAKQNEKNMENDKWDFNRMVASGIFKMKEVSFDFNEEDDNRVSVLVH
DIKPIFLDGKNIYTKQIECVSVVKDENSQMAIISKKGSNVLRFQREKADKTKMRQRFWEL
AGSRMGSILGVKKIEENKDSADFTEEGDLDYKKSSQYASALIKKQESVSEFTRTKTIKQQ
REYLPIYSVREELLKAVGESKVLIISGETGSGKTTQLTQYLYESDYASHGNGMIGCTQPR
RVAAVSVAKRVAEEIGCELGQEVGYSIRFEDCTTKNTRIKYMTDGVLLRESLNDPDLEQY
SCIIMDEAHERSLNTDVLFGILKKVAQRRRDIKIIITSATMNSRKFSDFFDGASIFEIPG
RTFPVGIRFDKAAAEDYVDAAVKKALQVHIQEPPGDILIFMTGQEDIEVTCLLLAEKIAS
QETIPPITILPIYSQLRSDDQAKIFESSKQRKCIVATNIAETSLTLDGVRYVIDTGYCKI
KVYNPKIGMDALQITPISQANANQRSGRAGRTGPGICYRLYSDTNFRSDMLENNIPEIQR
TNLANVVLLLKSLNIDDLLQFDFMDPPPQETILNSMYQLWLLGCLDEAGSITDLGRKMAQ
FPLDPPLTKMLITADELGCTEEILTIVSMLSVPSVFYRPKGREEESDAVREKLLISESDH
LTLLNVYEQWKKNDYSGQWCSDHFIQVKTLRKVREVRSQLKDIAKQQNLKLTSCNYDYDL
VRKAICSAYFTHAAKIKSIGEYTNLRTAMPCRVHPSSALFTLGHAPDYVVYHELIMTTKE
YMSCVTSVDPKWLEEMGPMFFSVKEYYGHRRDRSQIQAEATNRIELSNRIALEKQTEMRI
KKQQEMELEKQQRDQLVESSNKKAPKLATGRRIANTSLLNRNIDED |
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| NT seq |
3381 nt +upstreamnt +downstreamnt
atgtcttcaaaagacaaaaaaacagataaaagaagaagtcgttctcgaagttacgaaaaa
gacaacagtcgtaaatcagattattccaatagatcaagtaaaaatagtggatcttctagt
tataggggtagtagatatgatgatgaacaaagcgattataaagataagtaaagtcaatct
tcattaaaagattactctaggccatcaaagtatagctaatctgaaaaaagaagagaaagg
tcaagtcgttcacgttcacgctcaaacgaaagaaatgataaaggaagtaggacatcaaaa
tataataatagctatgaaaaaggatcttcatcatcatatacataatcaacatagcaatca
actaacaaaagagatactggaacaaaagaaaatccagcatataaactctcaagcggacct
gtaatgtttgttggttcaaaaggagcaacattagtcaaaaaaactcctttacctccttca
agaaatgcagaaggtaatggaggagaccaattcaaggctcctgctccaagagggtaagga
ggttaaacaaattagtattaagggtattaaactagtaaaagacaaaatcgaaatgaaaat
gaatgggatgattatgaaggtaaagcagaataatactggtatgattaggatgaaaatggt
aattactttgatgaagctgaagaggctatttttgtaggagatgagtaagcatttagagcc
aaagaagaataattagaaatgatgaaataaaaaaaataaaatgcaaaacaaaatgaaaaa
aatatggaaaatgataagtgggatttcaacagaatggttgcctctggtatatttaaaatg
aaagaagttagctttgattttaatgaagaagatgacaatagagttagtgtcttggtgcac
gatattaaacctatatttttagatggtaaaaatatatacacaaaacaaattgaatgcgta
tcagtagttaaggatgaaaattcataaatggcaattatttctaaaaagggttcaaatgtg
ctccgtttctaaagagaaaaagcagataaaacaaaaatgcgttaacgtttttgggagtta
gcaggttctcgtatgggttcaatattaggagtaaaaaaaatagaagaaaacaaagattct
gcagattttacagaagaaggtgatttagattataaaaaatcatcttaatatgcttctgct
ttgataaaaaaataggaatctgtcagtgaatttacacgtacaaaaactataaaataacag
agagagtatcttcctatatattctgtaagagaagagttgttaaaagcagtaggtgagagt
aaggttttaattatatctggtgagactggttctggtaaaactacttaattaacttagtat
ttatatgagagtgattatgcatcacatggaaatggaatgattggatgtactcaacctcgt
agagttgcagcagttagtgttgcaaaaagagtagctgaagaaataggatgtgaattagga
taagaagtaggttattctatccgttttgaggattgcactactaaaaatacaagaataaaa
tatatgactgatggtgttctattaagagaaagtttaaatgatccagatcttgaataatat
tcttgcattattatggatgaagctcatgaaagatctttaaatacagatgttctttttggt
attctaaaaaaggtagcttaaagaagaagagatataaaaatcattatcaccagtgctact
atgaactctagaaaatttagtgatttctttgatggagcatctatttttgagattccaggt
agaacatttcctgtaggtattaggttcgataaggcagcagctgaagactatgttgatgca
gctgttaaaaaagccctataagttcatatttaagagccaccaggagatattttaattttt
atgacaggacaagaagatattgaagtaacttgtttacttttggctgaaaaaatagcaagc
taagaaacaattcccccaattacaatactacctatttattcctaattgagatcagatgat
caagctaaaatctttgaatcatcgaaataaagaaaatgtatagtagctactaatatagca
gaaacatcccttacacttgatggtgttagatacgttattgatacagggtattgtaaaatt
aaagtttacaatccaaaaataggtatggatgcactgtaaataactcctatttcataagca
aatgctaattaacgttctggaagagcaggaagaactggtcctggtatttgttataggctc
tatagtgatacgaatttccgttctgatatgcttgaaaataacatcccagaaatacagaga
accaatttggctaatgttgttttacttttaaaatctttaaatatcgacgatctgttgtaa
tttgacttcatggatcctcctccataagagacaatccttaattctatgtatcagttgtgg
ttgcttggatgcttggatgaagctggatctatcactgatttaggaaggaaaatggcttaa
ttccctctagatcctcctttaactaaaatgcttataacagcagatgaacttggctgtaca
gaagaaattttaacaatagtcagtatgctaagtgttccttctgttttttacagaccaaaa
ggaagggaagaagaaagtgatgctgttagagagaaacttttaatttctgagagtgaccat
ttaacactattaaatgtatatgaataatggaaaaaaaatgactattcaggttaatggtgt
agtgatcactttatttaggttaaaacgttaagaaaggtaagagaagttagatcatagctt
aaagatatagccaaataacaaaatttaaagttgaccagctgtaattatgattatgatctt
gttagaaaagcaatctgctctgcatatttcactcatgctgcaaagattaaatcaattgga
gaatatactaatttacgtaccgctatgccttgcagagtgcatccttcaagtgcacttttt
actctcggacatgcacctgattatgtagtttatcatgaattaattatgacaacaaaagaa
tatatgagttgtgttacttcagtagatcctaaatggttagaagaaatgggtcctatgttc
tttagtgtaaaagaatattatggacatagaagagatagatcataaattcaagctgaagct
acaaatagaatagaacttagtaatcgtatagctcttgagaaataaacagaaatgagaata
aaaaagtaataagaaatggaattagaaaaataacagagggattaattagtagaaagcagc
aataaaaaagctcctaaactggctacaggtagaaggatagcaaatacatcattactaaat
agaaatattgatgaagattga |
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