Tetrahymena thermophila: TTHERM_00388250
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Entry
TTHERM_00388250 CDS
T01020
Name
(RefSeq) SNF2 family amine-terminal protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
tet
Tetrahymena thermophila
Pathway
tet03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TTHERM_00388250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tet03021
]
TTHERM_00388250
03036 Chromosome and associated proteins [BR:
tet03036
]
TTHERM_00388250
Transcription machinery [BR:
tet03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
TTHERM_00388250
Chromosome and associated proteins [BR:
tet03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
TTHERM_00388250
RSF complex
TTHERM_00388250
WICH complex
TTHERM_00388250
B-WICH complex
TTHERM_00388250
NORC complex
TTHERM_00388250
BRF complex
TTHERM_00388250
NuRF complex (fruit fly)
TTHERM_00388250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
7838810
NCBI-ProteinID:
XP_001019329
TGD:
TTHERM_00388250
UniProt:
Q23RG4
LinkDB
All DBs
AA seq
1111 aa
AA seq
DB search
MTTKSRKSKTEMEEMNTPDQDEFEQKKKKIEEILQKALDYTQKLILHRKEASKQAIQQTD
DFKSKKKESKRKHDREQQQQINKEERIMQRKSTGSENDYTYLTVQPSNIQFGVLKNYQMN
GLNWLIQLYELKMNGILADDMGLGKTIQTISMIAFLKQFKHINGKHLIIGPLATLNNWLN
EFTKWLPCCKATILYAREEERNKTLQEYVKSDKFEVIITSYEGIKKSASDLQKIQWEYMI
VDEAHKLKNDQSQLSLLLRKFKTKNRLLLTGTPLQNDIHELISLLNFVMPQIFTDCDTFD
EFLTSKKKKQSESESDRQQENNEEPNEEYNQEDNLSEIDKQKMELVKQLHQIITPFMLRR
TKEDSLKDLPPKKEIHLYVGLSDLQLKMYRNILLNKTIDSVYIGDQKRNYNNTLMQLRKV
CIHPYLFDGVEDRSLPEYGDHLVYNSGKMVVLDKLLKKLYQEKEKAHQVLIFTQFTTCLD
ILEDYLIGKAWNYCRIDGSTEVNEREQMMNEFQRDDSDKFVFLLSTRAGGLGINLTKANF
VVIFDSDFNPQIDLQAMDRAYRIGQTREVKVIRLITQFTVEEKIIERQGIKLKLDQLIIQ
SGRSYSTNFNLDQHNIKNITQFGADEIFKAKGSTISDDDIDMILAKGEKKTDEQNKEIQK
LVEEKMKGLFDLEVKSIKCKELFGEDPRLQDEIAIKQAALQSELEEKKKIYEDQIKKNKL
IKVKIIQLPEYQLFESKSRLEQLLQKEEEYLARGGIMYKVGLYSEEFIQNMAKNNGLTDD
ELKEKEQLMQQGFPYWDANDYKEFLKASYLYGRGDFEKIAAFMNKPLDEVRDYHRAFWQR
GEKCISNFNYIQKKVETTDKNIQMAKEFTDFVKMKIDDSEYIQENITFDSKIYKKYSSQK
HSLDKDQLIIYSFYKYGYGEWEKILYDIQNNVYFSLDENFRMMRESDIKARARSLFNILK
AENDNQLLGVRQRQIQLKKMQEENKQNKKGGKKAQKQDSESSNNSILSRNSADKDGFNKV
KPTNKEAKKDQKRQKLVSEKPQQIIEDDIENIEKNVIKKENKNKNKKNAVEKQNVNQKDQ
ENQQKQKILQDNQNENKLENYFSKIDKIVKK
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgactacaaagagtagaaaatcaaagactgaaatggaggaaatgaatactccagattaa
gatgagtttgaataaaagaagaaaaaaatagaagaaatcctgcagaaagctttagattat
acttaaaaacttattctacatagaaaagaagctagtaaataggcaatatagtagacagat
gattttaagtcaaaaaagaaagaatcaaaaagaaagcatgacagagaatagcaacaataa
attaacaaagaagaaagaattatgtaaagaaaatcaactggtagcgaaaatgattatact
tacttgacagtttagcctagtaatatttaatttggtgtattaaagaattattaaatgaat
ggtttgaactggctaatatagttatatgaattgaaaatgaatggaattttagctgatgat
atgggtttaggaaagaccatttaaacaatctctatgatagcctttttaaagcaatttaag
catattaatggtaagcatttgattattggacctcttgcaacattaaataattggttaaat
gaatttactaaatggcttccttgctgtaaagcaactattttatatgctagagaagaagaa
agaaataaaactctttaggaatatgtgaaatctgataaatttgaagttattattacttct
tatgaaggcatcaaaaaatctgcatctgacctttagaaaatttaatgggaatatatgatt
gtggatgaagcacataaattaaaaaatgactagagtcagctcagtttacttttacgtaaa
tttaaaacaaaaaatagattgctgctcactggtacacctctccaaaacgacattcatgaa
ttaattagtttgcttaattttgtcatgccataaatttttactgactgtgatacatttgat
gaatttttaacctctaagaaaaagaagcaatcagagtctgagtctgacagatagcaagaa
aataatgaggaacctaacgaagaatataattaagaagacaatcttagtgagatagataaa
taaaaaatggaattagttaaatagcttcatcaaattattacacctttcatgcttagaaga
accaaagaggattcacttaaagatttacctcccaaaaaagaaatacatttgtatgttggt
ttaagtgatttacaattaaaaatgtatagaaacattcttctaaacaaaacaatagacagt
gtatacataggagattaaaaaaggaattataataatacactaatgtagctcagaaaagta
tgtatacatccttatctttttgatggtgttgaagacagatctctcccagaatatggagat
caccttgtttacaatagtggtaaaatggtggtcttagacaaattgcttaaaaaattgtac
caagagaaagaaaaagctcatcaagttttgatttttacttaattcacaacttgtttagat
attttagaagattatttgataggaaaagcttggaattattgtcgtatagatggtagtaca
gaagttaatgaaagagaataaatgatgaatgagtttcaaagagatgactccgataaattt
gttttccttctttcaactagagcaggtggattaggaattaatttgacaaaagctaacttt
gttgtaatatttgatagcgattttaacccatagatagatttgtaagcaatggacagagca
tatagaattggttaaacgagggaagtgaaggtgatcagactaattacttaatttactgta
gaagaaaaaataatagagaggtaaggtattaaattgaagttggattaacttatcatacaa
agtggaagatcttattctacaaatttcaacttagactagcataacataaagaatataacc
taatttggtgcagatgaaatattcaaagcaaaaggatcaaccatctcagatgatgatatt
gatatgattctggcaaaaggtgaaaaaaagactgatgagtaaaataaagaaatataaaaa
ttagttgaagaaaaaatgaaaggactgtttgatttagaagttaaaagtatcaaatgcaaa
gagctatttggtgaagatcctcgtttataggacgaaatagctattaagcaagctgctctt
taatcagagcttgaagaaaagaaaaaaatttacgaagattaaattaaaaaaaataaatta
attaaagttaagattatttaattacctgaataccagctttttgagagtaaatcaaggtta
gagcaactattataaaaagaggaagagtacttagctagaggaggaataatgtacaaagtc
ggtttgtacagtgaagaatttatataaaatatggcaaaaaataatggtcttactgatgat
gaattgaaagaaaaagagtaattaatgtaataaggatttccttattgggatgctaatgat
tacaaagaatttttgaaagcttcttacttgtacggaagaggtgatttcgaaaaaattgct
gcatttatgaataaacctttagatgaagtcagagattatcacagagctttctggtaaaga
ggagaaaaatgtatcagtaactttaattatatttaaaaaaaagttgaaactactgacaaa
aatatttaaatggctaaggagtttacagattttgttaaaatgaagatagatgacagtgag
tatatttaagaaaatattactttcgatagtaaaatatacaaaaaatattcaagctaaaaa
cactccttagataaagattaattaataatatattcattttataaatatggatatggtgaa
tgggagaagattttatatgatatataaaataacgtttactttagtctcgatgaaaacttt
agaatgatgagagaaagtgatattaaggcaagagcaagatcactattcaacattttgaaa
gcagaaaatgataactaattgctaggagtgcgttaaagataaatataactcaaaaagatg
taagaagaaaataaatagaataaaaaaggaggaaaaaaagcataaaagtaagatagtgaa
tcaagtaacaattcaatattaagtagaaatagtgcagataaagatggctttaacaaagta
aaaccaaccaataaagaagctaaaaaagattagaaacgtcaaaaattagttagcgagaaa
cctcaacaaattattgaagatgatatagaaaacatagaaaaaaatgtaataaaaaaagaa
aacaaaaataaaaacaaaaaaaatgctgtggaaaaacaaaatgtaaatcaaaaagaccaa
gaaaactaataaaaataaaaaatattataagataatcaaaatgaaaataaattagaaaat
tattttagtaaaattgataaaatagttaaaaagtga
DBGET
integrated database retrieval system
