Tetrahymena thermophila: TTHERM_00410250
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Entry
TTHERM_00410250 CDS
T01020
Name
(RefSeq) vacuolar sorting protein, putative
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
tet
Tetrahymena thermophila
Pathway
tet04142
Lysosome biogenesis
tet04145
Phagocytosis
tet04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
TTHERM_00410250
04142 Lysosome biogenesis
TTHERM_00410250
04148 Efferocytosis
TTHERM_00410250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tet04131
]
TTHERM_00410250
Membrane trafficking [BR:
tet04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
TTHERM_00410250
Hops complex
TTHERM_00410250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS18_solenoid_2nd
Pep3_Vps18
VPS18_solenoid_1st
VPS18_RING_C
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-RING_Vps41
zf-RING_11
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
7836062
NCBI-ProteinID:
XP_001020818
TGD:
TTHERM_00410250
UniProt:
I7MKX7
LinkDB
All DBs
AA seq
1186 aa
AA seq
DB search
MDQDSEGFQERIDLPDPFEKKKMDFGLPDYESIKQLQITEKQLVILTETGKIFRQLYEER
IQLQEIELPQSSQPIYNIVTNIFGKSQSYEPIEKFFLDKTGNHCLLQGKNEQTYYWHASE
NKIKIVLSKFNKDITSLAFDDAAISDQEVAFLFGTKSKEFFYGRIQRRKTNDIEFTCYQI
DSLVTKSPIQKIFIYQLDYQKTNYTCVLVCDDQTFNYFYDEQPLPNLFKKYEKGSENLDE
IPINPPGNIIIHMAKKIGCNRPHSFAYTTGSTIICLQLSSVNELPNDSFLKNFKFLQYAK
TEEDSRKDVKDRFLIEERILKIGLTEFHYFLLHEDCLTVMSRLDQKVVTTFELGNMQGPV
IDMIYDDSSSQRSFLIYSRKRILKIVINMEEEFACYDLIKQKDIKGAYELCKRTNLDCLP
YVSGLYGDYLYQEGKYVTAAQVYSTSQKTFEEIMIKFLKNESLEQIEGIIEYLQIQAARL
NNQKNQVQFKIISGLSLEYYNYKINELEKYLEVLIQEEAQKELEKQSDQHLKFKIEYRGN
QLQVVYLDNLNEMRLRKQSGEDQTPMSQPSNKLSNDGQADQKRKASQNSITSKRIVRIQS
KLKKIKDNYNSFLKNLNSQIDQEFVYEITQSHGRIDDCLQYAKEQNNYENVITHYVNEQN
YKEAVSYLKVLAKKDSKRAIEIIYKFSYILLQKVPEEFISLVLNSIRDFQPSKLISGLMN
IPGTFRKFGIQFLENCVYKQKSSDKIIHNLYLFFLANQIRPDENSQTQKVDEEAYQQLMD
YLNKAEEQENQQIYGSLQNDDSEISLYSQKSSRNSQKQQNYILKFDLDFALHLFESKMIT
DAMVKTYALMNFYDLAVKLALDKNNISLAKEYASKHHNDDKKHKLWLKIAVHLIQTQQSQ
NVLQLTNDSNGYLKVEDLLPHFGEVHQIDLLKEQICSNLEDYNNEIENLKKEMDQLNEMS
DSLKREINTYSHKSLQIKGEQDCSICHRNLLSQDHYFFGCFHGFHRNCYIQRMQSDIIAE
QEKEQISDQGEKQLTSYSQKRVFDKIISINQYINKIQSDLKNKQEEEIKQMKLMLIDENQ
QQQSSSITKFFKGLGGALIGGAGKKEDEQQATIDINAFKKKLSSMANLKDMLQLFLSQEE
RDEYYKQVQIVDDFLSKECYFCGLSSVDRIHTFYPKNTKSSIDWAI
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggattaggattctgaaggtttttaagaaaggattgatttgccagatccatttgaaaaa
aagaaaatggattttggcctacctgattatgaaagcatcaagcaactgtaaattacagaa
aagtagttagtcattttaacagaaacagggaaaatttttagataattatatgaagaaaga
atttaattgcaagaaatagaattgccataatcatcatagcctatttataatattgttact
aacatttttggaaaaagctaatcatatgagcctatagaaaaattttttttagataagact
ggaaatcattgcttactgcaaggaaaaaatgagtaaacatactattggcatgcatctgaa
aacaagattaagatagttttgtctaaattcaataaagatataacatctttggcatttgat
gatgcagcaatctctgatcaagaagttgctttcttatttggaacaaaaagcaaagaattt
ttttatggtagaatacaaaggagaaagacaaatgacatagagtttacttgctattaaatt
gattcgctagtaacgaagagccctatttaaaagattttcatttatcagctagattattaa
aaaaccaattacacatgtgtacttgtatgtgatgattagacctttaattacttctatgat
gagcagcctttgccaaatctttttaaaaagtatgaaaaaggaagtgaaaatcttgatgaa
ataccaatcaatcctccaggaaatataattatacatatggctaaaaaaattggttgtaat
agacctcattcttttgcttataccacaggttctactataatatgtctataattatcatct
gttaatgaattacccaacgactctttcttgaaaaactttaaatttctttagtatgctaaa
acagaagaagattctcgtaaagatgtgaaagatagatttttaattgaagaaagaatcctc
aaaataggattaacagaatttcattactttttgcttcatgaggactgtctaacagtaatg
agtagattagattaaaaggtagttactacatttgaactgggaaatatgtagggacctgtg
attgatatgatctacgatgattcttccagttaaagatcttttcttatttattctagaaag
agaattttaaaaattgtgattaacatggaagaagaatttgcatgctatgatttaattaag
taaaaagatataaaaggtgcttacgagctatgcaagagaacaaatttggactgtcttcct
tatgtttctggtttatatggagattatttgtattaggaaggaaagtatgtgactgctgca
taagtttattcaacatcataaaaaacattcgaagaaattatgattaagttcttaaaaaac
gaatcacttgaatagattgaaggcataatagagtatctgtaaatttaagctgcaagactc
aataattagaaaaattaggtttaatttaaaataatttcaggattgagcttagaatattac
aactataaaattaatgaattagagaagtatttagaagtgcttatttaagaggaggcataa
aaagaattagaaaagtaatcagactaacatcttaaatttaaaatagaatatagaggcaat
tagctacaggtagtttatttagataatttaaatgaaatgagattgagaaagcaaagtggt
gaagatcaaacaccaatgtcttagccctcaaataaattgagtaacgatggttaagctgat
taaaaaagaaaagcttcttaaaattctatcacaagtaaaagaattgtcaggatataaagc
aagcttaaaaaaataaaagataattataactcatttttgaaaaatcttaattcttaaata
gatcaagaattcgtttatgaaataactcaaagtcatggaagaattgatgactgcttacag
tatgcaaaggagtaaaataattatgaaaatgttataacacattatgtaaacgaataaaat
tacaaagaagctgtcagctatctaaaagttttagccaaaaaagacagcaaaagagccata
gaaatcatatacaaattttcttacattttactctaaaaagttcctgaagaattcatttct
ttggtcttaaactctatcagagatttccaaccttctaaattgatatcaggattaatgaat
attccaggcacctttagaaaatttggaatctaatttttagaaaattgtgtttataaataa
aagagctctgataaaatcattcacaatctttatctttttttcttggcaaaccaaattcgt
cctgatgaaaacagccaaacttaaaaagttgatgaggaagcttactaataacttatggat
tacttgaacaaagcagaagaacaagaaaactagtaaatttatggaagtttatagaatgat
gattctgaaataagtttgtattcataaaaatcatcaagaaattctcaaaagcaacaaaat
tatattctgaaatttgatttagattttgcacttcatttatttgaatcaaaaatgattaca
gatgcgatggtcaagacctatgctttgatgaatttttatgatttagcagttaaattagct
ttagataaaaataacattagccttgctaaagaatatgcttcaaagcaccataatgatgat
aaaaaacataaattgtggctcaaaatagcagttcatttaatttaaacatagtaatcccaa
aatgttctataattaacaaatgacagtaatggttatttaaaagtagaggatcttcttcca
cattttggagaagttcatcaaatagacctactcaaagaataaatttgcagtaatttagaa
gactataacaatgagattgaaaatttgaagaaagaaatggattaactaaacgaaatgtca
gattcacttaagcgtgaaattaatacttattctcataaatctctatagattaagggagaa
taggattgcagtatatgtcacagaaaccttctttcataagatcattatttctttggctgc
ttccatggttttcatagaaattgctacatttaaagaatgtaaagtgatataatagctgaa
taagagaaagaatagataagcgattaaggcgaaaaataactaacttcttattctcaaaag
agagtttttgataaaataatatcaataaattagtacatcaataaaatctaatcggattta
aaaaataaacaagaagaagaaattaagtaaatgaaattaatgttaatagatgaaaatcaa
taatagtaatcctcttcaattactaaattctttaaaggacttggaggtgctttaataggt
ggagcaggtaaaaaagaagatgaataataagctactatagatattaatgctttcaaaaaa
aaactaagttctatggcaaatctcaaagatatgttataattatttttaagttaagaagaa
agggatgaatattataaacaagtataaattgttgatgactttctctcaaaagagtgttat
ttttgtggactttcttctgttgatcgtattcatacattttatcctaaaaatactaagagt
tctattgattgggcgatttga
DBGET
integrated database retrieval system
