Tetrahymena thermophila: TTHERM_00418660
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Entry
TTHERM_00418660 CDS
T01020
Name
(RefSeq) U3 small nucleolar RNA-associated protein
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
tet
Tetrahymena thermophila
Pathway
tet03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TTHERM_00418660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tet03009
]
TTHERM_00418660
Ribosome biogenesis [BR:
tet03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TTHERM_00418660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
7827040
NCBI-ProteinID:
XP_001007321
TGD:
TTHERM_00418660
UniProt:
Q22NT5
LinkDB
All DBs
AA seq
710 aa
AA seq
DB search
MGDKIRLQVEGMLPEMLQLVKRKIFTKDEVNQILKERENNEYLLERKNASVKDYLKVIEY
EYGLEKMRRKRFKALKIKKENQKDFAIIRRILQLWDKITYKFRYRVDIWKQYLSFCYFID
SKKSFFKAITAALRFNPYNLDLWLSAAYYESDINGNPFKGRKIFYKALKQNTKAVNFWIE
YFKYEVKFIEKVMTRQILLTSDAKDIKEKELEAGADFLGFEDDKNKSDVLLELDNINSSD
LEQMLTVLKEVYKLALENFKVTEFGFEFLQSINGIKGKWFSEIQNTVTQDIRESINSEQN
LVLKNKYIAQLALTINGFSKQTLASDGLNEHLEELAKKISEDKDLVQYSKEIYKYLLEFL
IENKNLISIDNVQKLNTDSQFLQQTTQQQLDLDYLLLLSQFLTEFKINHNKDILEQLLNK
ISEQEEKVEDDNSLEQKNKENILEKLFNNKIGLLVLQGGQEKAIKYIRLKLQNQRANSPE
KRFNLLKKYYDIKMQIPSQFQEVNQQAFFNLCIEQLILSKEYFEQLILPFLGYLNEKNYS
QQVQVFMKKLLSYKQQCPLAIYLQYISQYQKVESKKNELSQLWIYISQWYKSDLTMWEAY
FKWQRDFGEVQQCPIILDRQVFANQSFEFVQKINFQISHRMIAILENDFLLLIYQLFKIN
EFFKCFLIAGTNKLIQNQFKKINKLFKKRASKTSGLDYSLLLATYNSIIQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataaaattagattataagttgaaggtatgctacctgaaatgctttagctcgta
aagcgaaaaatatttaccaaggatgaagtaaaccaaatattaaaagagcgtgagaataat
gaatatttgctcgaaagaaaaaatgctagtgtcaaggattacctaaaggttatagagtat
gaatatggattagaaaaaatgcgtagaaaaagattcaaagccttaaagatcaagaaagaa
aactaaaaagattttgcaattataagacgtatactttaattatgggataaaataacatat
aaatttagatatagagttgatatatggaaataatatttgtctttctgttacttcatcgat
tcaaagaaatctttctttaaagcaattactgctgccctccgctttaacccttacaatctt
gatttatggttatcagctgcatattatgaaagcgatataaatggtaacccttttaaaggc
agaaaaatattctataaggccctcaagcaaaatactaaggcagtcaatttttggattgag
tactttaaatacgaagtcaaatttatagagaaagtaatgactagataaattttacttacc
agtgatgccaaggatattaaagagaaagaattagaagctggggctgactttttaggtttt
gaagatgataaaaataagagtgatgttctactagaattggataatattaattcatctgat
ttggaataaatgcttacagtgttaaaagaagtctataaattagctcttgagaactttaag
gttacagaattcggatttgagtttttataaagtataaatgggattaaaggaaagtggttt
agtgaaatttaaaatactgttacctaagatataagagagtcaattaattcagaataaaat
ttagtgttgaaaaataaatatattgcttaacttgccttgacaataaatggattttcgaaa
taaacattagcaagcgatggcctaaatgagcatcttgaagaattagctaaaaaaatatct
gaagataaagatttagtttaatatagcaaagaaatttacaagtatcttcttgagtttttg
attgaaaataaaaatttaatcagcatagataacgtttaaaaattaaatactgattcttag
tttttataatagacaacttaacaacaacttgatttagattacctacttcttctttcccag
tttttgacagaatttaaaattaatcataataaagacattcttgaatagcttctcaataaa
ataagtgagcaagaagaaaaagttgaagatgacaacagcttagaataaaaaaataaagag
aatatattagagaaattatttaacaataaaattggtttattagtgttgcaaggtggttaa
gaaaaagctattaaatatataagactcaaattataaaactagagagccaactctcctgaa
aagcgtttcaacttattgaaaaaatattatgatattaaaatgtaaataccaagctaattc
taagaagtgaattagcaagccttcttcaatttgtgcattgagcagctcatcttaagcaaa
gaatattttgagcaactcattctccctttcctaggatatttaaatgaaaagaattatagc
caataggttcaagtttttatgaagaaattattatcctataaataataatgtcctttagca
atatacctctaatatatttcctaatactaaaaggttgaaagtaaaaaaaatgagctgagc
caattgtggatttacataagttaatggtacaaatctgacctaactatgtgggaagcatat
tttaaatggtagagagattttggagaagtgtaacaatgccccataatacttgacaggtaa
gtttttgctaattaatcctttgaatttgtttagaaaataaatttttaaatttcccacaga
atgatagcaattttagagaacgattttctattgcttatttattaactgtttaaaataaat
gaattttttaagtgcttcttaatagcaggaactaataaattaatataaaactaattcaaa
aaaataaataaattatttaaaaaaagggcctctaagacaagcggattagattacagttta
ttgcttgctacttataactctataatttaatga
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