Tetrahymena thermophila: TTHERM_00421000
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Entry
TTHERM_00421000 CDS
T01020
Name
(RefSeq) RNA-binding family CELF1 RNA recognition motif 3 in CELF/bruno-like protein
KO
K13207
CUG-BP- and ETR3-like factor
Organism
tet
Tetrahymena thermophila
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tet03041
]
TTHERM_00421000
Spliceosome [BR:
tet03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
TTHERM_00421000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RNA_bind
RRM_7
RRM_occluded
BRAP2
PHM7_cyt
Nup35_RRM_2
RBD_DGKtheta
CBM96
Endosulfine
Motif
Other DBs
NCBI-GeneID:
7831496
NCBI-ProteinID:
XP_001033355
TGD:
TTHERM_00421000
UniProt:
I7MH21
LinkDB
All DBs
AA seq
442 aa
AA seq
DB search
MNTNEYIDQFDQNKNMGAYYDSNGYAMQNQQQMDQTYQNPQNEIKEGGDLLKINNTQILI
RRQENTVDLKLFVGQLPKTWEKEQVKDFFSKFGRIYEVQIIRDNKGQHKGCAFVKFASMT
DAEKAIEAVKNTTFPGMKNNVEIKWADNEEERLGVNQDSDHKLFIGSLPKSCTEQNIKDI
FEFFGEIEELHLMKDNQQNTRQAFLKFKQKEKAHLAIRNLNSQVYINDAENPIEVRFAKK
YVKQEKPNPTPAPKPDPAPAPQQISWQKVYFKYYTEENEPYYFHPLLNTSAFDKPGPGSL
ILDIDGNQEYIDNNPRPTRNEPVVINDRKDVYGKKHGPPGANLFIFHLPNDYRDSDLEKL
FSEYGEVISARVNTRPDGTSKGFGFISYNHPSQAEAAITALNGLQIKNKRLKVEIKKEGM
DNNGNMKQSNPGSLNQTSFHPF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaacgaatacatagactaattcgattaaaataaaaatatgggagcttattac
gatagcaatggttatgctatgtaaaactagtaataaatggattaaacctaccaaaaccct
caaaacgaaattaaggaaggtggtgatctacttaaaattaacaatacttaaattttgatc
cgtagataggaaaatacagtcgatttaaaactctttgtcggttaactaccaaagacatgg
gaaaaagagcaagttaaagatttcttttctaaattcggcagaatttatgaagtttagatt
attagagacaataagggataacacaagggttgcgcttttgttaaatttgcttcaatgact
gacgcagaaaaagctattgaagctgtaaaaaacaccacctttccaggaatgaagaataac
gttgaaattaaatgggctgacaacgaagaagaaagacttggtgtcaactaagactctgac
cataaattatttattggttctcttcctaagtcttgcactgaataaaatattaaagatatc
tttgaattttttggtgaaattgaagaattacaccttatgaaggataactagtaaaacaca
agataagcatttttaaaattcaaacaaaaagaaaaagctcaccttgctatcagaaactta
aactctcaagtctacatcaatgatgctgaaaatccaattgaagttagattcgctaagaaa
tatgttaagcaagaaaagccaaatcctactccagctcctaaacctgaccctgctcctgct
ccttagcaaatcagctggtaaaaagtatacttcaaatactacactgaagagaatgaacct
tactacttccatcctcttctaaatactagtgcctttgacaaacctggtcctggaagcttg
attttagatattgatggaaatcaagaatacatagataacaaccctagacctacaagaaac
gaacctgttgttattaatgatagaaaggatgtttatggcaaaaagcatggacctcctgga
gccaatctttttatattccacttgcccaatgactacagagattccgatttagaaaaactc
ttttcagaatatggtgaggtaatttctgctagagtcaatacaagacctgatggaacaagc
aaaggatttggtttcattagttataaccacccatcttaggcagaggctgcaatcactgct
ctcaacggactctagattaaaaataagagactaaaagttgaaataaaaaaagaaggaatg
gataacaatggaaacatgaagcaatccaaccctggatctttaaaccaaacttctttccat
ccattctga
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