Tetrahymena thermophila: TTHERM_00426230
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Entry
TTHERM_00426230 CDS
T01020
Name
(RefSeq) DNA mismatch repair MutS family ATPase domain protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
tet
Tetrahymena thermophila
Pathway
tet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TTHERM_00426230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tet03400
]
TTHERM_00426230
DNA repair and recombination proteins [BR:
tet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TTHERM_00426230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
DUF4258
Motif
Other DBs
NCBI-GeneID:
7834338
NCBI-ProteinID:
XP_001013801
TGD:
TTHERM_00426230
UniProt:
Q23AD6
LinkDB
All DBs
AA seq
1134 aa
AA seq
DB search
MQINLKAKEFSTLDEDSSSDDDQEFVKRILGQTSKNENKSDINTNPIQSNAQIGQKQQSN
LKQNVANSYENQFKGLNGLYQNNSPQQKLQPQAKTSSNNLSGINKSLLNKSKKSTLNQSD
DEAEQMNIEEDQNSVQTNQNDFLNQFQMQSKQTTFKNSTSRQSKQYSGDNQKGSLSIPNK
EEEQLNQIPKFAQQRYRKDSRQIPFGNPQYDPTTLYIPPQEFSKLTSAMKQYWQIKAKHF
DKIILFKMGKFYELFYEDAIIATRLLDITFTNKELHCGFPEKALEKFASKLVQFGYKVVV
VEQTSKKTTTGIVDRDITQIITKGTINFTFEEQNHDPKYLLVIRQKTNQEFGIIVYESFT
SKIQVGLLQDDKTQTRLKSFLCVTKPQEIVYDPGNITSDILKILKSQYFQSVMSPMRDNK
DQWSTQLATFYIEKQFGSEVQKYPQELRDIRTNDEIRGQVINLKYAALAGFFSYMDSTLQ
LESILNSSEYVECDFDNKQFSQRMILDSQALQHLEIFENSQTALTTTFQQVDQKKGTLLN
YLDYTKTPYGKRMLKKWVCSPLIDISAINDRYDAIEDIQNNLAMKDKFQYGIARYADIER
LCSSIYRYSVKQKHAEKAVMYENISSARLKEFKNLINSMKEIEKLIEETFMVNQENFKSQ
RLKRLCTYRLKGDPKLSGDLPKVSSFIKVLEDIIVLDSKEKIAGKYIEQPVPKDGFCQEY
DSIRLQIKAYQDELDQYLEQLKVKFKTNDISYAFLNNRQYDIQVNKTLFDKIQKPADFSL
QSHSGSFQRFTSRFTSEKVAFIEELEEQLKEILSNFCVTVFREFYKKKHVWDKFVSIVAE
LDCLISISHACFTMADGVMCRPVIKFAKNQKETFFYLKQGRNPNLIQLDLKQVPNDIILG
NIAGMNAQPNIMILTGPNMGGKSTTLRLFCLSAILAQIGCYVPAEQCEFSLVDRIFTRIG
AGDKLIEGKSTFYIEMEEVKNSIMYGTYNSIAIFDELGRGTSTFDGVAIAFGILKYFIEK
IQSRCIFATHFFLLINELRFYKEISFYHMEYYYDNKSKKLIFKYKLKQGNAESSFGIDLA
KIVGIEQSVLNLAQKKQLEFENSLEYAEVEKQQTIKQFNGLISKLFTYEKDRIQ
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcaacttgaaagcaaaagagtttagtacactcgatgaagattcatcgtcagat
gatgattaagaattcgtcaaaagaatattaggataaacttctaaaaatgaaaataaatca
gacattaatactaatccgatttaaagcaatgctcaaataggacaaaaatagtaaagcaat
ctaaaataaaatgtagctaatagttacgaaaattaattcaagggattgaatgggttatat
taaaataattcacctcaataaaagcttcagccataagctaagacttcatcaaataatctc
tcaggaatcaacaaatctttattaaataaaagtaaaaagtctactttaaattaaagtgat
gatgaagctgaataaatgaacatcgaagaagactaaaatagcgtttagacaaaccaaaat
gattttttaaactaattctagatgcaatcaaaacaaactacttttaagaactcaacttca
agataaagcaaatagtatagtggagataattaaaaaggcagcttatcaatacctaataaa
gaggaggaatagttaaattaaatcccaaaatttgcttaacaaaggtatcgtaaagattcc
agataaattccatttgggaatccataatatgacccaacaactttgtatattccaccctaa
gaatttagtaaactcacaagtgcgatgaaatagtattggtaaataaaagcaaagcatttt
gacaaaatcatcttattcaagatgggaaaattttatgaactcttttatgaagatgctata
attgcaactagacttttagatatcacttttacaaacaaagaattgcattgtggtttccct
gagaaggcattggaaaaatttgcttcaaagcttgttcaattcggatacaaagtagttgta
gtagagtaaacttctaaaaagacgactacaggtatagtagacagagacattacataaatc
attacaaaaggtacaattaacttcacttttgaagagtaaaatcacgatcctaagtatctc
cttgttatcagataaaaaacaaactaagagttcggtataattgtttatgaatcttttact
agcaaaattcaagtcggcctactgtaagacgacaaaacatagacaagactaaaatcattt
ttatgtgttactaaaccttaagaaatagtttatgatccaggaaatataacatcagacatt
cttaaaatattgaaaagttaatatttttagtctgttatgagtcccatgagagataacaaa
gactaatggagtactcagcttgcaaccttttatattgagaagcaatttggaagcgaagtg
caaaaataccctcaagaacttagagatattagaactaatgacgaaattaggggctaagtt
attaatttaaaatatgctgcgcttgcaggatttttttcatatatggattctactctccag
ttagaaagtattcttaattcctcagaatacgttgaatgcgatttcgataataaataattt
tcacaaagaatgatcttagacagccaagcacttcagcacttagaaatatttgaaaactct
taaactgctttaacaacaactttttaataagttgactaaaagaaaggaacacttttgaat
taccttgactacactaaaacgccatatggtaaaagaatgttaaaaaaatgggtttgctct
ccattgattgacatttcagctataaatgatcgttacgatgctattgaagatatttaaaac
aatcttgcgatgaaagataagttttaatatggaatagctagatacgcagatattgagcgt
ctttgctcttctatttacagatatagcgttaaataaaaacatgctgagaaagctgtaatg
tatgaaaatatttccagtgcaagattgaaagaatttaaaaatttaattaattcaatgaaa
gagatcgaaaaacttattgaagaaacatttatggttaaccaagaaaattttaagagttaa
agactcaaacgtttatgtacttatagactgaaaggtgatccaaaactttctggagattta
cctaaagtcagtagctttataaaagttcttgaggacattattgtcttagactctaaagaa
aaaatagcaggaaagtatatagaataaccagtaccaaaggatgggttttgctaagaatat
gatagcatcagacttcagattaaagcttattaagatgaacttgattaatatttagaacaa
ttaaaagtaaaattcaaaacaaatgatatttcatatgcatttctgaataatagataatat
gatatttaagtcaacaaaactctttttgataaaatataaaaacctgctgatttctctcta
taaagccattctgggtcgtttcagagatttactagcagatttacatctgaaaaagttgca
ttcattgaggagttggaggaataacttaaagaaattttatcaaacttctgtgtaactgtg
tttagagagttctataaaaagaagcatgtttgggataaatttgtaagtatagtagctgaa
ctggattgcttaataagcataagccatgcttgctttacaatggctgatggtgttatgtgc
agacctgtcataaagtttgcaaaaaattaaaaagaaacctttttctatttaaaataagga
agaaaccctaatctaatttaattggatttaaaataagttccaaatgatatcattctagga
aacattgcaggaatgaatgcttagcctaatattatgattttaacaggtccaaatatgggt
ggtaaatcaacaactttaaggttgttctgtttatctgctattttagcttaaataggttgt
tatgttcctgcagagtaatgcgaatttagtttagtggacagaattttcacaagaattggt
gctggtgataaattgatagaaggaaaaagtacattttatatagaaatggaagaagttaaa
aattcaattatgtatggtacttacaacagtattgcaatatttgatgaattaggaagagga
acttccacatttgatggtgtagctattgcttttggaattcttaaatattttattgaaaaa
atttaaagtagatgcatatttgctacccattttttccttttgataaatgaattaagattt
tataaagaaatatccttttatcatatggaatactattacgataacaaatctaaaaagctc
atatttaaatacaaacttaaataaggcaacgcagaaagcagctttggtatagatttagca
aagatagtcggtatagaataatctgtacttaatttagcctaaaagaagtaactagaattc
gaaaacagcttagagtatgcagaagtagaaaagtaataaactataaaatagtttaatggg
ctcatttctaagctatttacctatgaaaaagatagaatataatga
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