Tetrahymena thermophila: TTHERM_00442760
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Entry
TTHERM_00442760 CDS
T01020
Name
(RefSeq) MIF4G domain protein
KO
K14327
regulator of nonsense transcripts 2
Organism
tet
Tetrahymena thermophila
Pathway
tet03013
Nucleocytoplasmic transport
tet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TTHERM_00442760
03015 mRNA surveillance pathway
TTHERM_00442760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_00442760
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
TTHERM_00442760
mRNA cycle factors
P-body specific factors
TTHERM_00442760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Motif
Other DBs
NCBI-GeneID:
7837542
NCBI-ProteinID:
XP_001033189
TGD:
TTHERM_00442760
UniProt:
I7M057
LinkDB
All DBs
AA seq
1026 aa
AA seq
DB search
MDSEQIPEEIKKFFDERAQLQSFRRQLRLQNIKAKENYANLKMDQRVLKLQQVTKFLNKL
KGSRPMDRDAILNEIDNYNLQNYISEITISIADYNITDNDILYFVQLCSKLHQSYEDFNI
QMVIQIQKQIKTIIPQKEKDEKVVAVKRRDMMRFIAELFVVGVTSQYDKMMECLKDIINH
KEARPLMLNVQTALMFSDRFGFEITRRKGIKISFNYNKYDDLVNIFDFDQIVTPEKIQKI
VMYFQYYLNILMDHLKNLYDLKIQQDEKLNKLISEEKLTEKDEQEYTRTRNNYINLYEAL
STIADNLELDFKVNFGEEEREKKQQKILEEQRRKKLEEEERLRQESENLFDTDEERAFYE
DIFDLKVKLPGSLFSNNYFQGNVQKTSANNENDDDLDQDNDNEKEQEEEEEEEKKDEEDE
DKDNDDIPKSYEQFKKNLKHCVSQEKADLLAEQFVYVNNKQNRKKLVKDILEYRKEYNLM
VPHLCRFVAVISKHFKDLGDMVVEKLIKDFDSYREKQRQDFSFRDKKMRYLKYLCELAKF
RVLELFKILNIFKSLVDDFNTQQVDLLCVIMDNVGRFIYNNQETRFRYITILDQLNVHLR
KANLPTNKSIQLENSISLSKPSKKKAIKSEKQRTELEQYIRFLVLEKLNEMSFREVTATI
QKLKWDEQLDDYCFNAIIKRALKGRIDDIQLCAGLLSFLNTFRPTLTLRIVDDLLEKTIY
GMEQNEVQEQQKRISVVRFLGELYLYQVVEIDFIFDLLYLCIDFGHEPFRTQEEIERIDS
QEDLFRISMICNILEPVRQYITKRRTFPKMLRFLIFFQRYILSKKYVPIDIEFMVLDTFE
SLDSGSSRLTKIKTYNDANELVNSIEQKEKKGTLKTVEEELKVFLGNLILKNNKLQDNNN
NSTQNDQKQNQTNKAPNEEEQKLKAINQQYDDDIERELNSIINHDTQIQSQMLNTKNVNY
KKKIINATAKVNIQDDSGQTKTITIIKKKKDTQKNDITNINNFIYGPDGLIQNEQIQFKM
PKTKKK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgaataaattcctgaagaaattaaaaaattttttgatgaaagagcttagtta
tagtcttttagaagatagctgagattgtaaaatattaaggctaaggagaattatgctaac
ttaaaaatggattaaagagttttaaagctttagtaagttaccaagtttctcaataaactt
aagggaagcagacctatggatagagatgctattttgaacgaaatagataactataatttg
caaaactacattagcgaaattactatctcaattgctgattataatatcactgataatgat
attctttactttgtttagctttgttccaaacttcattaaagttatgaagatttcaacata
caaatggttatttagatttaaaagcaaatcaaaacaattatcccttaaaaggaaaaagat
gaaaaagttgtagcagttaaaagaagagacatgatgagattcatcgctgagctctttgtt
gtaggcgttacaagctaatacgataaaatgatggaatgcttaaaagatataataaatcat
aaagaagctcgtcctcttatgttaaatgtttaaacagctttaatgttttctgacagattt
ggatttgaaattactcgtcgcaaaggcattaaaataagttttaactacaacaagtatgac
gatttagtcaatatctttgactttgatcaaattgttacacctgaaaaaatataaaaaatt
gttatgtatttctaatattatttaaatatattaatggatcatctgaagaacctctacgat
ctaaaaattcaataagatgaaaagctaaataagctaataagtgaagaaaagcttacagaa
aaagatgaataggaatacactagaacaagaaacaattatattaatttatatgaagctctt
tctactattgctgataatctagaattggattttaaagtaaactttggagaagaagaaaga
gaaaaaaaataacaaaaaattctagaggagtagaggagaaagaaattagaagaagaagag
cgtcttcgctaagaaagtgaaaatttatttgacactgatgaagaaagggcattctatgaa
gatatatttgacttaaaggttaagcttcctggatctcttttttccaataattacttctaa
ggaaatgtttaaaagacatctgcaaacaatgaaaatgatgatgatttagattaagacaat
gacaatgaaaaagaataagaagaggaggaggaagaagaaaaaaaagatgaagaggatgaa
gacaaagataatgatgatattcctaagtcttatgagcaatttaaaaagaacttaaaacac
tgtgtcagctaagaaaaggcagatttattagcagaatagtttgtatatgttaacaataaa
taaaatagaaaaaaattagttaaagacattcttgaatacagaaaagaatataatttgatg
gttcctcatttgtgtagatttgttgctgttattagcaagcattttaaagatttgggtgat
atggtcgtagaaaaattaattaaagattttgactcctacagagaaaagtagagacaagac
ttttctttcagagataagaaaatgagatatttaaaatatttatgtgagctagctaaattt
agagttttagagcttttcaaaattttaaatatttttaaatctcttgttgatgattttaac
acttaataagtagatttactttgtgttatcatggataatgtaggtagatttatttataat
aactaagaaactcgttttagatacatcactatccttgactagcttaacgttcatcttcgt
aaagctaatttacccacaaataagtccatatagcttgaaaactctatcagtctatccaag
ccctcaaagaaaaaggcaattaaatctgaaaaataaagaactgaattagagcaatatatt
agatttttggttttggaaaaattaaacgaaatgagcttcagagaagttactgctactatc
taaaaacttaaatgggatgagtagcttgacgattattgcttcaatgctatcattaagaga
gctttaaagggaagaatagatgatatatagctatgcgctggtttactctctttcttgaat
acatttagaccaacactaactcttagaattgtagatgatctattagaaaagactatttat
ggaatggaataaaatgaagtttaggaataacaaaaaagaatcagtgttgtgagattctta
ggagagttatacttatattaagttgttgaaatagattttatttttgatttgctttatcta
tgtattgattttggtcatgaaccttttagaacctaagaagaaatcgaaagaattgatagc
taagaggatttattcagaatttctatgatttgcaatatccttgaacctgttagataatat
atcacaaagagacgcacattccctaaaatgcttagattcttaatctttttccaaagatat
attctctctaagaagtatgttcctatagacatagaattcatggtcctagatactttcgaa
agtctagattcaggtagcagcagattgacaaaaattaaaacttacaatgatgctaatgag
cttgttaattctatagagtaaaaagagaaaaaaggaactctgaaaacagtggaagaagaa
ttgaaagtatttttgggaaaccttattttaaaaaataataaactgtaagataataataat
aactcaacccaaaatgattaaaaataaaattaaactaataaagcacctaatgaagaagaa
caaaaactcaaagctataaatcaataatatgatgatgatatagaaagggaactcaattca
attataaatcatgacacttaaatttaatcataaatgttaaatacaaaaaatgtaaactat
aaaaagaaaatcatcaatgctactgctaaagttaacattcaagatgattctggatagact
aaaaccatcacaattattaaaaagaaaaaagatacataaaaaaatgatataaccaatatt
aataatttcatatatggtcctgatggtttaattcaaaacgaacaaattcaatttaaaatg
cctaagactaaaaagaaatga
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