Tetrahymena thermophila: TTHERM_00444310
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Entry
TTHERM_00444310 CDS
T01020
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tet
Tetrahymena thermophila
Pathway
tet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TTHERM_00444310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tet03041
]
TTHERM_00444310
Enzymes [BR:
tet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TTHERM_00444310
Spliceosome [BR:
tet03041
]
Complex C
Other components
Step II factors
TTHERM_00444310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
Flavi_DEAD
AAA_30
GIPC1_GH2
Ploopntkinase3
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
7826928
NCBI-ProteinID:
XP_001023293
TGD:
TTHERM_00444310
UniProt:
I7MLT8
LinkDB
All DBs
AA seq
1291 aa
AA seq
DB search
MASNLQYVLLSQQVMQQLKTQLGIQDKDLVDYFIDQAFESDTEQQFAENIKDDAELSDQF
ISSLYKLIKSKQSLIKPKVDLQAQNKQLEDKKNKFSAGDPQKIDIEIEKEDIKQKEKVKR
DENYENEDSDEEQNELKRQELEKRKQYAKIFPALAQRDEIDLDQPQPEQKVDKNSSKFDP
KPTNIDARQEKEKETSNKEISRKKSSKHSRSRSKSHKKEKSKRRSRSRSQGKSKKKYSRS
RSKEKKNRSYSKEKKSRRSRSKSHEKKKKRDSPDAKKDHRKKYQRDSNSPLREKKGRENS
SRSRSQEKQTRQQFKRQEVEKDSILDGVVSKISEFGCFVTLENVGGRKEGLVHISQLSSK
RVGNIQEVARIGQRVKVKVISVIGNKISLSMKDVDQITGLDKFEQKIRYEESQSLKYDPL
EQKEKKAFGVLDKDDIIKSNQNSKFGALTGILLEDKEEKNKKRIRESSQEKWERKQAEYY
SSKHLGIDKGEIDLDEGCSEDEDVEVEIRENETPFLKDTTTKAGVNLSPIRVTKNQNGSL
SRQALNAVQQAKDRREIRIQQNNALVDSINKQELQKMNLDPTAESIFLLSNLKKLGDAQT
SEIPEFKKEAMFKAALNNSNKPKQTMTIKEQKESLPIYQYKEQLIKACINNQILIVIGET
GSGKTTQMTQYLLEAGFCKSGKKIGCTQPRRVAAMSVAKRVSEEMGVVLGEEVGYSIRFE
DCTSASTVIKYMTDGMLLREALLDTELSNYSVIMLDEAHERQLNTDVLFGLLKKVAKKRK
DFHLIITSATLDAAKFSNYFFDCQVFRVPGRTFKVDVLYSVEPEQDYVEASLIVIMQIHL
HEPPGDILLFLTGQEEIDNACQILFQRMKNLGPDAPELIILPLYAGLPNELQNRIFLPTP
EGKRKCIISTNIAEASLTIDGIYYVVDPGFAKIKVYNPKLGMDSLIVAPISQASAKQRQG
RAGRTGPGKCFRLYTEDAFKNEMLPTSIPEIQRTNLANTVLLLKAMGINDLINFDFMDPP
PIQTLISALEHLYTLGCLDDEGLLTRLGLKMAEFPLEPPLSKMLITSVDLGCSDEIATII
AMLSVQNVFFCPKDKKQQADQRRAKFHHQDGDHLTLLTVYEAWKSNNFSNIWCHENFIDS
RTIKRAQDIRKQLIGIMDRYHLPVQSCGKNYAKIRKAICAGFFNHAAKKDRNEGYKTIID
NHTVNIHPTSALFQKQPDWVVYHELVLTTKEYMRNISTIEPKWLVEVAPNFFQNVNPHVL
SKAKKAEKLESLSTKSGDNEAWRLSKRRGNG
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaatttatagtatgtccttctcagctagcaggttatgcaacagctgaaaaca
caactaggaatttaggataaagatttagtagattattttatagattaagcatttgaatca
gatactgagcaatagtttgctgaaaatattaaagatgatgcagaattatcagactaattt
atttctagtttatataaattgattaagtcaaagtagagcttaattaaaccgaaagttgat
cttcaagcataaaataaataacttgaggacaagaaaaataaattttctgcaggagatcca
taaaaaattgatattgaaatcgaaaaagaggatatcaagcaaaaagaaaaggttaaaaga
gatgaaaattatgaaaatgaagatagtgatgaagaatagaatgaattaaaaagacaagaa
ctagaaaagagaaagcaatatgctaaaattttcccagctcttgcatagagagatgaaata
gatctggattaaccttaaccagagtaaaaagtggacaaaaatagtagtaaattcgatcca
aagccgactaatattgatgcaagataagaaaaagaaaaagagacttcaaataaagaaatc
agtagaaaaaaaagtagcaagcattcaagaagcagaagcaagtctcataaaaaggaaaaa
agtaaaagaaggtctagaagtcgctcataaggtaaaagtaagaagaaatactctagaagt
aggtcaaaagaaaaaaaaaatcgctcttattcaaaagaaaagaaaagtcgtcgttcacgc
tctaaatctcatgaaaaaaagaaaaaaagggattcccctgatgcaaaaaaagatcataga
aaaaaatattagagagattcgaattcaccactcagagagaaaaagggtagagaaaatagt
tctcgcagcagatcataagaaaagcaaactcgttagcaattcaagagataagaagttgaa
aaggactcaattttagatggagttgtttctaaaataagtgaatttggttgttttgtaaca
ttagaaaatgttggagggcgtaaagaaggtttggttcacattagctagctttcaagcaaa
agagttggaaatatttaagaagtagcgagaattggataaagagtaaaagtaaaagtaata
agtgtgataggaaacaaaattagtttgagtatgaaagatgttgattaaataactggttta
gataagtttgaacaaaaaatacgatatgaggaatcctaatctctcaagtatgaccctctt
gagtagaaagaaaagaaggcatttggtgtgttagataaagatgatattatcaaatcaaat
taaaattcaaagttcggtgctctaacaggtattctacttgaagataaagaggaaaaaaat
aaaaagagaatcagagaaagttcttaagaaaagtgggaacgtaagtaagcagaatactat
tccagtaaacatttgggtattgataaaggcgaaatagatttagatgaaggttgttcagaa
gatgaagatgttgaagttgaaattcgtgagaacgaaactcccttcttaaaagatacgaca
acaaaggcaggagtaaacttatctcctattagagttactaaaaactagaatggctctttg
agtagacaagcacttaatgcagtttaacaagcaaaagatagaagagaaattcgtatttag
caaaacaatgctttggtagatagtattaacaaataagaactctaaaaaatgaatttagat
cctactgcagaatctattttccttttaagtaatttaaagaagttgggagatgcttaaaca
tcggaaattccagaatttaaaaaagaagcaatgtttaaggctgctctcaacaactctaac
aaaccaaaataaactatgacaatcaaggagtaaaaagaatctcttcctatctattaatat
aaggaataacttatcaaagcttgcattaataattaaattcttattgttattggtgaaacc
ggttcaggaaaaacaacttaaatgacatagtatctcttagaagcaggcttttgtaagagt
ggtaagaaaattgggtgtacctaacctcgtcgtgttgcagctatgagtgttgctaagcgt
gtttctgaagaaatgggtgtagtacttggtgaagaagtaggttattcaatacgttttgaa
gattgtacatctgcttctacagtaattaaatatatgactgatggtatgcttcttcgtgag
gccttgcttgacacagaactaagcaactactcagttattatgctcgatgaagcacatgaa
agatagctaaatacagatgttctttttggtttacttaagaaagtagctaagaaaagaaaa
gattttcatttgattattacttccgctacccttgatgctgcaaaattctctaattatttc
tttgattgctaagttttccgtgtaccaggtcgtaccttcaaagtcgatgtcctctactct
gtagaacctgaataggattatgttgaagcttctttaattgtaatcatgcaaattcacttg
catgaacctcctggcgatattctccttttcttaacaggtcaagaagaaattgataatgca
tgctaaatattattctagcgtatgaagaacttaggtccagatgcacctgaacttattata
ttacctctttatgctggtttgcctaatgaactatagaatagaattttccttcctactcct
gagggaaaacgtaaatgtattatatcaactaatattgcagaagcatctcttaccatcgat
ggtatttactatgtcgtagatccaggatttgcaaaaattaaagtttacaatccaaaactt
ggtatggattccttgattgttgcaccaatttcataggcttcagcgaaataacgttagggt
cgtgcaggtcgtacaggtcctggtaaatgtttccgtctttatactgaagatgctttcaaa
aatgaaatgctcccaacaagtatacctgaaattcagcgtacaaacttagcaaacacggtt
ttacttttaaaggcaatgggtattaatgatttaatcaacttcgattttatggatcctcct
cctattcaaactttgatttctgctttagaacatctttacactttaggttgtttggatgat
gaaggtctccttacacgtctcggtttgaaaatggccgaatttcctttagaaccacctctc
tctaaaatgcttataacaagtgttgatcttggatgttcagatgaaatagctactattatt
gctatgttgtcagtttaaaatgtatttttctgtccaaaagataaaaaataacaagctgac
cagcgtcgtgctaaatttcatcattaagatggagaccacttaactcttttgactgtatac
gaagcttggaaatcaaacaatttttcaaatatttggtgtcatgagaatttcatagattct
agaacaataaaaagagcacaagatattcgtaaacagttgataggtatcatggaccgctat
catttacctgtttaatcgtgtggtaaaaattatgccaaaatccgtaaggctatatgtgca
ggcttctttaatcatgcagcaaaaaaagatcgtaacgaaggatacaaaactatcatagat
aatcatactgttaacatacatcctacatctgcacttttttagaagcagccggattgggta
gtttatcacgaattagttttgacaactaaagaatatatgagaaatatttccacaatagaa
ccaaagtggcttgttgaagttgcaccgaatttcttttaaaacgtaaaccctcatgtatta
tcaaaagctaaaaaggctgaaaagcttgaatcactctcaactaaaagtggtgataacgaa
gcttggcgtctgtctaaaagaagaggaaatggttga
DBGET
integrated database retrieval system
