Tetrahymena thermophila: TTHERM_00444830 Help Entry TTHERM_00444830   CDS       T01020                                  Name (RefSeq) RNA recognition motif protein   KO K10643   CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] Organism tet  Tetrahymena thermophila Pathway tet03018   RNA degradation Brite KEGG Orthology (KO) [BR:tet00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     TTHERM_00444830  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:tet03000]     TTHERM_00444830    03019 Messenger RNA biogenesis [BR:tet03019]     TTHERM_00444830    04121 Ubiquitin system [BR:tet04121]     TTHERM_00444830 Enzymes [BR:tet01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      TTHERM_00444830 Transcription factors [BR:tet03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     TTHERM_00444830 Messenger RNA biogenesis [BR:tet03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      TTHERM_00444830   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      TTHERM_00444830 Ubiquitin system [BR:tet04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     TTHERM_00444830 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RRM_1 Nup35_RRM_2 zf-RING_4 Motif Other DBs NCBI-GeneID:  7823375 NCBI-ProteinID:  XP_001023346 TGD:  TTHERM_00444830 UniProt:  I7MHM2 LinkDB All DBs AA seq 930 aa AA seqDB search MSAKIKPKQPQKRLQCQYCKEKIENDNYYLCDCGYQYFNQSLQTQECFTKLLQIIQILLV TKININKFFSYGIRIKREYFQFEVCLIEMCWDCYDDFQDNQEPFCPKCDAELISDSEDEQ ITKPKNEPPLSKSTSLQNQGANSQLKSSPSAVNKSSSSTVGAASSANTTTTTSSINTSGF NYNDLAKVRVIKKNLVYVIGLAPEIANEETLLKKEYFSQYGKITKIVVNTNNAYNPKGPN GPSYSAYITYSSEREASMAILGTEEYQINDRIIRASYGTTKYCSYFLKQQDCPNLPECLY LHSFGKDKEFFQKDEATSNKNIFIDQQKMAIKNIQKYIPDLVKIKNTPVTYNSVLPTPQS VIEKLIEQDVLDIKQKPAESNSNDQKGDKKKKEDNTPLIDQWSIDFSIPQTAPKKDKEDS KKQESSSPQQTVRKQSKSISEKDLNTNNTQPTSKSPQQNQQSSTPPETSSNKQQEGEKSN KIQQSANGQQQSEEKAFSKEEFLMKAMNGVLQSPSRSHSSSLSLQNNTNTNQTQNQNIIQ NSNQGKPQSQTIQNNSQTNITINNSNSNSNLQKAASQVVAEQTKKVEKSPIKEQIQKQDE QKKDEQIESRKTGNASAGSSNQSSNVASTNHSRTSSTNQKASGSNSYPQNQASNTNGINN KQNSVTQNGNHAEKKETSRKEQSENKYQKHQYIPVNQQTKQSSQSVEPQKETNLQTQNVT QQQQQQNQQQSPAPLESQPKQKEDNKQVKSSTASQQKPQNGSQNSQQTQTQQQNHQNEQV NILAQSKQQNTQNGLQQQVQNSQNHNIQTSQHQQSPSTSTSSSNVTPHNSSIHPHHQHTV SEPIAPKYILQKVEKREKTLSSDNQIMKRLITRTTHQKSASSRFDFAKNSENSDQPVEDV DVINHIFNGQYIILTKSYNQSSNNFDKNEY NT seq 2793 nt NT seq  +upstreamnt  +downstreamnt atgtcagcaaagataaaaccaaaataacctcagaagagattgtagtgttaatattgcaag gaaaagatagaaaatgacaattactatttatgcgattgtggatattaatattttaatcaa tcactttagacataggagtgttttaccaaattactttagattatccaaatccttttagtc actaaaataaatatcaataagtttttttcatatggaattcgaataaaaagagagtatttt caatttgaagtatgtctgattgaaatgtgttgggattgttatgacgatttttaagacaat taagaaccattttgccctaaatgtgatgcagaattaatatctgactcagaagacgaataa attacaaaacctaaaaatgagcctccactttctaaatctacttctctataaaatcaaggg gctaatagccaactgaaatcttcaccatcagcagtaaataaatcaagtagtagcactgta ggagcagcaagttctgcaaatacaactactaccacatcatcaataaatactagcggtttc aactataatgatctagcaaaagtaagagttatcaagaaaaatttagtatatgtgattggt ttagctccagagatagccaacgaagagaccttgttaaagaaggaatactttagttagtat ggaaaaataacaaaaatagttgttaatacaaataatgcatacaatccaaagggaccaaat gggccttcttattcagcatatataacatattcttctgaaagagaagcttctatggctata ttaggaacagaagagtattaaataaatgatagaataattagagcttcatatggtacaact aaatattgctcttactttttaaagtagtaagactgtcctaatttacctgagtgtttatat cttcattcatttggaaaagataaagaatttttctaaaaagacgaagcaacatcaaataaa aatatatttattgaccaataaaagatggctataaaaaatatacaaaaatatatacctgat ctagttaaaataaaaaatacaccagtgacatataattctgtactacccactccataaagt gtaattgaaaagttaattgaataagatgtcttagatataaaacaaaaaccagcagaatca aattcaaacgattaaaaaggtgataaaaagaaaaaagaagacaacactcctttgattgat tagtggagtatcgatttttctattcctcaaacagctcctaaaaaagataaagaggattca aagaaataggaatcttcttctccacaataaacagttagaaaataatctaaatcaatatct gaaaaagatctcaatacaaataatacataaccaacttccaagtctccttagtagaattag taaagcagtacaccaccagaaacatcttcaaataaataacaagaaggtgaaaaatctaat aagatataataatctgctaatggttagtaataaagtgaagaaaaagctttttcaaaagag gagttcttaatgaaagctatgaatggagttttataaagtccatctcgcagtcactcttct tctctttcattacaaaacaacacaaacacaaactaaacatagaattaaaatattatacaa aactctaactaagggaaaccttagtcataaactatataaaataatagttaaacaaacatt acaataaataatagcaattcgaattctaatctataaaaagctgctagctaagttgtagct gagtaaaccaaaaaagtagaaaaatctcctataaaagaataaatctagaaataagatgaa taaaaaaaagacgaataaatagaaagtagaaagacaggaaacgcctctgctggaagtagc aactaatctagtaatgtagcaagtacaaatcactcaaggacttcttctactaattaaaaa gcatctggttcaaatagctatcctcaaaactaagcttctaatacaaatggaataaataat aaataaaactctgtcactcaaaatggaaatcatgctgaaaaaaaagaaacaagcagaaaa gagcaatcagaaaataaatattaaaaacactaatacatacctgtaaatcaataaaccaag cagtcatcgcaatcagttgaaccttagaaggaaactaacttataaactcaaaatgttaca tagcagcaacaacaatagaattagtaatagtcccctgcacctcttgaaagttaaccaaaa taaaaggaagacaacaaataggtaaaatcttcaactgcttcttagcaaaagccttaaaac ggtagccaaaatagctaataaacttaaacataataataaaatcattaaaacgaacaagtt aatatcctggcttaatctaagtagcaaaatacataaaatggcttacaacaataggtttaa aatagctaaaatcataatatataaacttctcagcactaatagagccctagtacttctact agtagtagcaatgttactcctcataactcctccatacatcctcatcattagcatacagtt tcagaacctattgcacctaaatatatcctataaaaagtagaaaaaagagaaaaaacttta agctctgacaattaaattatgaaaagactgattacaagaacaacacatcaaaaaagtgct tcttctcgctttgattttgctaaaaactctgaaaatagtgactaacctgttgaagatgta gatgtaataaatcatatctttaatggacaatatataatcttaacaaagtcatataattag agttcgaataattttgataaaaatgagtattga

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