KEGG   Tetrahymena thermophila: TTHERM_00446180
Entry
TTHERM_00446180   CDS       T01020                                 
Name
(RefSeq) RNA polymerase Rpb7, amine-terminal domain protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
tet  Tetrahymena thermophila
Pathway
tet03020  RNA polymerase
tet03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TTHERM_00446180
  09124 Replication and repair
   03420 Nucleotide excision repair
    TTHERM_00446180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tet03021]
    TTHERM_00446180
   03019 Messenger RNA biogenesis [BR:tet03019]
    TTHERM_00446180
   03400 DNA repair and recombination proteins [BR:tet03400]
    TTHERM_00446180
Transcription machinery [BR:tet03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     TTHERM_00446180
Messenger RNA biogenesis [BR:tet03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TTHERM_00446180
DNA repair and recombination proteins [BR:tet03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TTHERM_00446180
SSDB
Motif
Pfam: SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 7843801
NCBI-ProteinID: XP_001023380
TGD: TTHERM_00446180
UniProt: I7LWZ3
LinkDB
AA seq 173 aa
MFYHTSGLRTILQIHPTHMGMLIGNDKVNLNNNDLLKKELIEKVEGKKSNEHGYIILVVN
LRYMSKPLIDYDGFIKVEIQFDALTFKPQLKEYIDIQITEIKQNHIAGSVGPMNIFYVPN
RKLPQQLQNELKDGKLESDDLTLYEGDKLRVLIETINNDKILCKVDDDFNSYQ
NT seq 522 nt   +upstreamnt  +downstreamnt
atgttttatcatacatctggtttaagaactattttgtagattcaccctactcatatgggt
atgcttattggaaatgataaagtcaaccttaataataatgatttgcttaaaaaagaatta
attgaaaaagtagaaggtaaaaaaagtaatgaacatggatatattattttggtagtaaat
ttaagatatatgagcaaaccattaattgattatgatggctttattaaagttgagatatag
tttgatgcattaacatttaaaccataacttaaagaatatattgatatctaaataactgaa
atcaagcaaaatcacattgctggttctgttggccctatgaacatattttatgtccccaat
cgtaagcttccttaacaactttaaaacgaattaaaagatggtaaacttgaatctgatgat
ttaaccttatacgaaggtgataaattgagagttttgatagaaactattaacaatgataaa
atcctttgtaaagtagatgatgattttaatagttattaatga

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