Tetrahymena thermophila: TTHERM_00462849
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Entry
TTHERM_00462849 CDS
T01020
Name
(RefSeq) Spt4/RpoE2 zinc finger protein
KO
K15171
transcription elongation factor SPT4
Organism
tet
Tetrahymena thermophila
Pathway
tet03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
TTHERM_00462849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tet03021
]
TTHERM_00462849
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_00462849
Transcription machinery [BR:
tet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
TTHERM_00462849
RNA polymerase I system
TTHERM_00462849
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
TTHERM_00462849
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
DUF4193
RUBY_RBDX
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
7825718
NCBI-ProteinID:
XP_001471396
TGD:
TTHERM_00462849
UniProt:
A4VDJ6
LinkDB
All DBs
AA seq
125 aa
AA seq
DB search
MADFDYDEEEQDFENYDEDVYNENIEVKKIIPPNDFKRKLLACTNCYFILTQEQWRDYQN
CPNCDVSSNNPKPTAKFTGITCITDPAKSWQTNRMRIVKRKDVKVPGAYAVNINEDYDYQ
QDTFE
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttgattacgatgaagaagaacaagattttgaaaactacgatgaagacgtt
tacaacgaaaacatcgaagtgaaaaaaataattcctccaaacgattttaaaagaaaactg
ttggcatgcacaaactgctatttcatattaactcaagaatagtggagagattatcaaaat
tgtcctaactgcgatgtatctagcaataatcctaaaccaactgcaaagtttacaggtatt
acatgcatcactgatccagcaaaaagttggtagacaaacagaatgagaatagtcaaaaga
aaagatgtaaaagttcctggagcttatgcagtcaatataaacgaagattatgattattaa
taagacacctttgaatga
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integrated database retrieval system