KEGG   Tetrahymena thermophila: TTHERM_00462849
Entry
TTHERM_00462849   CDS       T01020                                 
Name
(RefSeq) Spt4/RpoE2 zinc finger protein
  KO
K15171  transcription elongation factor SPT4
Organism
tet  Tetrahymena thermophila
Pathway
tet03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    TTHERM_00462849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tet03021]
    TTHERM_00462849
   03019 Messenger RNA biogenesis [BR:tet03019]
    TTHERM_00462849
Transcription machinery [BR:tet03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     TTHERM_00462849
  RNA polymerase I system
     TTHERM_00462849
Messenger RNA biogenesis [BR:tet03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     TTHERM_00462849
SSDB
Motif
Pfam: Spt4 DUF4193 RUBY_RBDX Zn_ribbon_IS1595
Other DBs
NCBI-GeneID: 7825718
NCBI-ProteinID: XP_001471396
TGD: TTHERM_00462849
UniProt: A4VDJ6
LinkDB
AA seq 125 aa
MADFDYDEEEQDFENYDEDVYNENIEVKKIIPPNDFKRKLLACTNCYFILTQEQWRDYQN
CPNCDVSSNNPKPTAKFTGITCITDPAKSWQTNRMRIVKRKDVKVPGAYAVNINEDYDYQ
QDTFE
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcagattttgattacgatgaagaagaacaagattttgaaaactacgatgaagacgtt
tacaacgaaaacatcgaagtgaaaaaaataattcctccaaacgattttaaaagaaaactg
ttggcatgcacaaactgctatttcatattaactcaagaatagtggagagattatcaaaat
tgtcctaactgcgatgtatctagcaataatcctaaaccaactgcaaagtttacaggtatt
acatgcatcactgatccagcaaaaagttggtagacaaacagaatgagaatagtcaaaaga
aaagatgtaaaagttcctggagcttatgcagtcaatataaacgaagattatgattattaa
taagacacctttgaatga

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