Tetrahymena thermophila: TTHERM_00471279
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Entry
TTHERM_00471279 CDS
T01020
Name
(RefSeq) ubiquitin specific protease 39 and snRNP assembly factor
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
tet
Tetrahymena thermophila
Pathway
tet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TTHERM_00471279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tet03041
]
TTHERM_00471279
Spliceosome [BR:
tet03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
TTHERM_00471279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
CDC4_D
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
7830047
NCBI-ProteinID:
XP_001470681
TGD:
TTHERM_00471279
UniProt:
A4VF07
LinkDB
All DBs
AA seq
529 aa
AA seq
DB search
MSKYKQEIEEVIRKKQKLLEELELSKNTQEVIDDNLAVEDGERKRKIPKIKDDNTKQQEL
GNDEILDSQLVKDAYNTQNEHDEEQNEEIQEKKNDIRKECPFIITIKRHLLDFDFEKLCS
ISLANLNVYACLICGKYYQGRGRNTHAYLHSLETNHHMYINLHNAKVYCLPDNYEVIDQS
LNDIKYNLAPVYSDQQLANLDTMDTKSRALNGIYYQPGFVGLNNIKMNDYVNVIIQALCR
IPVLRNQIIRFNNTVNQDVFDLKTLISKRFSNLVKKIWNPRNFKGQVSPHELLQAIVLKS
KKKFTINEQSDPIKLLSWLLNNIQSELSNTNYKNLIDECFKGEVEIHTYTPLQNQIGYSS
VPEIENKPFIYLTLNIPPPPLHKDDHKKINIPEQPLFNLLKKFDGITTHDNPKYRKTYRI
KKLPKYLILHMERFTFNKYYLEKNPTIVRFPLNNLDLKGYIDEGKSLRYNLLVNICHEGT
AKAGTYKIHVRNKANNTWFEIQDLYITQVLPQRISVSEAYIQIYERIDD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagtataaacaagaaattgaagaggttattcgcaaaaagcaaaagcttttagaa
gagctcgagctttcaaaaaatacataggaagttatagatgacaatttagcagtcgaagat
ggagaaagaaaaagaaaaatacctaaaataaaagacgataatactaaatagtaagaactt
ggaaatgatgaaatattagatagttaattagtgaaagacgcatacaatacttagaatgag
catgatgaggaataaaatgaagaaatttaagaaaaaaagaatgatattagaaaggaatgt
cccttcattattacaattaagagacatttattagattttgacttcgaaaagctttgtagt
atttcattagctaacttaaatgtatatgcatgccttatttgtggaaaatattattaaggc
agaggtagaaatactcatgcatacttgcactctttagagacaaatcatcatatgtatatt
aatttgcataatgccaaagtttattgcttgcctgataattatgaggttatagattagagt
ttgaatgatatcaaatacaatttagcaccagtgtattctgattagtaattagccaattta
gatacaatggatacaaaatctcgtgcattaaatggtatttattattaacctggatttgtt
ggtttgaacaacattaaaatgaatgattatgttaatgttatcatttaagctctttgtaga
atacctgtgctaagaaattagattattcgctttaacaatacagtaaattaagatgtcttt
gatttgaaaactttaatttcaaagcgtttttcaaatcttgttaaaaaaatatggaatcct
agaaacttcaaaggttaggtttctcctcacgagttactctaagcaattgttttaaagagt
aagaaaaagtttaccataaatgaacaaagtgacccaataaaattactcagttggctttta
aataacatataatctgaattaagcaacactaactataaaaatcttattgatgagtgcttt
aaaggtgaagtagaaattcacacatacactcctttataaaatcagataggttattctagt
gttccagaaatagaaaataagccattcatttatttaactttgaacatccctcctccacct
ctgcacaaggatgatcacaaaaaaattaacattcctgaacaacctcttttcaatctcttg
aaaaaattcgatggaataaccactcacgataatcctaaatacagaaaaacttatagaatt
aaaaaattacctaaatatttaatattacacatggaacgtttcacttttaacaagtattat
ttagaaaagaatcccactattgttcgtttcccattgaacaatcttgacttaaaaggatat
attgatgaaggaaagagtttaagatataatctgttggtaaatatatgtcacgaaggaaca
gcaaaagctggtacatataaaatacatgttagaaataaagccaacaacacctggtttgaa
atccaagatttgtatatcacataagttttaccttaaagaattagtgtatcagaagcctac
atttaaatatatgaaagaattgatgattga
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