Tetrahymena thermophila: TTHERM_00471730
Help
Entry
TTHERM_00471730 CDS
T01020
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
tet
Tetrahymena thermophila
Pathway
tet03013
Nucleocytoplasmic transport
tet03015
mRNA surveillance pathway
tet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TTHERM_00471730
09122 Translation
03013 Nucleocytoplasmic transport
TTHERM_00471730
03015 mRNA surveillance pathway
TTHERM_00471730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_00471730
03041 Spliceosome [BR:
tet03041
]
TTHERM_00471730
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
TTHERM_00471730
Spliceosome [BR:
tet03041
]
Common components
Common spliceosomal components
Cap binding complex
TTHERM_00471730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
7832252
NCBI-ProteinID:
XP_001033057
TGD:
TTHERM_00471730
UniProt:
I7M6K8
LinkDB
All DBs
AA seq
236 aa
AA seq
DB search
MASFLYDSLQPQSLYYDKKSELSEQDYKKRLETTTTVYVGNLHFQTRESALYELFSRAGQ
IKDLIMGINKEGQSAGFCFVVYHTHEEARIAVEYISQTKLNDRVIRVDWDYGFKEGRQFG
RGMDGYQKRDQYRQQNDSGRHNIHQQWKERQQQQFQERSNSRGGFRGGNNYNQGQREGYK
GRFNNNQGNHNFDENSQNRYKKSYNQFRNEQKERSNSSSPEYPKKKRQQQDDENDD
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctttttgtatgatagtctttaaccttagagtttgtattatgataaaaaatca
gaacttagcgaataggattataaaaaaagacttgaaactactacaactgtatatgtagga
aatttacatttccaaacaagagagagcgcactttatgaattattctctcgtgcaggataa
attaaagatcttataatgggtattaataaagaaggttaatcagcaggattctgttttgtt
gtttaccacactcacgaagaagctagaatagcagttgaatatatttcatagacaaaacta
aatgatagagtgattagagtagattgggattatggttttaaagaaggaagatagtttgga
agaggtatggatggatatcaaaaaagagattaatacagataataaaatgactctggacgt
cataatattcattagtaatggaaggagcgttaacaatagcaattttaagaaaggtctaat
agtagaggtggctttagagggggcaacaactataattaaggataaagagaaggttataag
ggaaggtttaataataattagggcaatcataactttgatgaaaatagttaaaatagatat
aaaaagagctacaactaatttagaaatgaacaaaaagaaagaagtaattcaagttctcca
gaatatcctaagaaaaagagataatagtaagatgatgaaaatgatgattga
DBGET
integrated database retrieval system
