KEGG   Tetrahymena thermophila: TTHERM_00473150
Entry
TTHERM_00473150   CDS       T01020                                 
Name
(RefSeq) CAF1 family ribonuclease
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
tet  Tetrahymena thermophila
Pathway
tet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TTHERM_00473150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tet03019]
    TTHERM_00473150
Messenger RNA biogenesis [BR:tet03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TTHERM_00473150
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     TTHERM_00473150
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 7832457
NCBI-ProteinID: XP_001023898
TGD: TTHERM_00473150
UniProt: I7MHV9
LinkDB
AA seq 384 aa
MSQQGTRKKLKLKEVKTTQIIDVWQDNFEKELCEIIKLIEEYKIIALDTEFPGIQQLPYK
VSHEKDFEFKLIRESVKNSKIIQIGISLANEDGEVPADRPFTWQFNFNFDEENDQIKQES
LDLLKNAGIDFKELKKRGISREQFSDLVSESDIILNEELTWIVFHGGFDFAYLLQMLYGS
PIPDSSSSFYNLLKSFFPNVYDVKYLIKDLQYMKDSGLNKVAQELKVDRIGPQHQAGSDS
LLTLGVFFKLRDDVLQQKMKKSINVIYGIGEGFIVSKTKDYLQHYKLKYHQQYQDMDYTH
QNFMNQQMPNMTDYFEQMFTNMNPFQQFSAHKIIQNLSNHQNNMQMGYYSPFFNIMQQQA
ELNMMQGHKNMDAIYKKKYSSAKM
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgagccaataaggaacaagaaagaaattgaaattgaaagaagtgaaaaccactcaaata
atagatgtttggtaggataattttgaaaaggaattgtgtgaaataatcaagcttattgaa
gagtacaaaataattgcactggatacagagttcccaggaatttagcaacttccttataaa
gtttcacatgaaaaggattttgagtttaaattaatcagagaaagtgttaaaaactcaaaa
attatttaaattggtataagtttggctaatgaagatggagaagtacctgcagatagacct
tttacttggcaatttaatttcaattttgatgaagaaaatgaccaaattaaataagaatct
ctagatttacttaaaaatgctggaattgacttcaaagaactcaaaaagagaggtattagt
agagaataattttctgatttagtatcagaatcagatatcatattaaatgaagagttaaca
tggattgtatttcacggtggttttgattttgcatatttattgtaaatgctttatggatca
ccaataccagatagctcctcttccttttataaccttttgaagtcatttttccctaatgtg
tatgacgtaaagtacttaataaaagatttgtaatacatgaaagacagtggactaaataaa
gttgcataagaattgaaggtagatagaattggaccttagcattaagcaggcagtgatagt
ttactgaccctaggtgttttctttaaattgagagatgatgtgttataatagaagatgaaa
aaaagtataaatgtaatttatggtattggtgagggttttattgttagcaaaacaaaagac
tacttacaacattacaagttaaagtatcactaataatattaggacatggattatactcat
taaaacttcatgaactagtaaatgccaaatatgacagactactttgaatagatgtttact
aatatgaatcctttctaacaatttagtgctcataaaataattcaaaacttatcgaatcat
taaaataatatgtagatggggtactactcacccttttttaatattatgtaataataagct
gagctaaacatgatgcaaggacataaaaatatggatgctatttataaaaagaaatatagc
tctgctaaaatgtga

DBGET integrated database retrieval system