Entry |
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Name |
(RefSeq) DNA topoisomerase I
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KO |
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Organism |
tet Tetrahymena thermophila
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:tet00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TTHERM_00497920
03460 Fanconi anemia pathway
TTHERM_00497920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:tet03032]
TTHERM_00497920
03400 DNA repair and recombination proteins [BR:tet03400]
TTHERM_00497920
Enzymes [BR:tet01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TTHERM_00497920
DNA replication proteins [BR:tet03032]
Eukaryotic type
DNA Topoisomerases
TTHERM_00497920
DNA repair and recombination proteins [BR:tet03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
TTHERM_00497920
FA (Fanconi anemia) pathway
TTHERM_00497920
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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AA seq |
916 aa
MSTDKENLSNNNPYSSWHSSKKQKQLEDKSNTYMSQQNSSKNLNKNVSQSSQKTNNNNRN
NNRKKRGYQQNVEHVYVRKDLVQTISQSCNIQKNSNNDNPNQYKQQDSRQVENRSLNKTN
LRQYQNQQNNFKNEELINMKANIGQEQIKEQNIQARTNQKQQVQDFKNEWSSDPKKYLTQ
KFYKNEDKCYNETYNIYSGKKGQIQEVLLVAEKPSVARKIASALSNKTSKKRQGKVRYLP
VYVYEGRFKGQKTIFKVTSVTGHVYDLDFPQKLKENWNEINPVQLFSSDTLKIPSKHNIV
RHLESEARNCSYLLLWLDNDKEGENICFEVKQICEKVMCFKGDNVQQVLRTRFSSLTKQD
IIKAFNGTTDPPNVNESKAVDARRIIDLKIGASFTRYQTLFFRNKYPDLNKRTISFGPCQ
TPTLGFCVEREDQIKKFIPSLLYKVKLTLQGSDNKTQMLAYSEQKETLSKEKAQYIFQSI
KLEKHIQIVSVSSETLVEECPVGLNTVEMLKAASSSLNMSPQQTMDAAENLYLKGFITYP
RTESTAYSSSFNFKKVLSSLQQDIEYGKFAQNLLNDGYIIPQKGNDTEDHPPITPTSNYP
RPENEGLISPQEKQLYDYISKHFIASLYDDYEYKKLNITCQVKNYQFISEAIRVEKQGYT
KVIKSTQLDQNIIQIDVKQSSKFQIKNISIEEEYSSPPRYLSESELIDLMSKNSIGTDAS
IPTHIQNIVDRKYVEIDQKNRTLIPTQLGRSIIDGYRKIDEELVSPQIRAQIENSVNQIA
KGDKEFSQVLNESLGLFQNKYINFVYNIKNMDNLVGLFCKTYKEVLQTAKPLSKCGFCQS
IMKFIEQSEQVVCQKCDIKFYLPKSGDLKISEDKICLKDNFQIIQFTSQNSNEGVIDICP
NCYSDQFYRKQKKYQL |
NT seq |
2751 nt +upstreamnt +downstreamnt
atgagcacagataaggaaaatctctctaacaataatccatattcatcatggcacagttct
aagaagtaaaaataattagaagacaaaagtaacacatacatgtcacaataaaattcctct
aaaaatctaaacaaaaatgtaagttaatcaagctagaagactaacaataataatcgcaat
aataatagaaaaaaaaggggttatcagtaaaatgtagagcatgtgtatgttcgaaaagat
cttgtttaaacaatatcttagagttgtaatatttaaaaaaattcaaataatgataatcct
aatcagtataaataataagattcaagataagttgagaacagaagcctaaataaaacaaat
ctaagataatattaaaattaataaaataattttaaaaatgaagaactcataaatatgaaa
gcaaacattggataggaataaataaaagaacaaaatatttaagctagaacaaactaaaaa
taataagtgtaagattttaagaatgaatggagttctgatccaaaaaaatacttaacttaa
aaattctacaaaaatgaagataaatgttataatgaaacatataatatttatagtgggaaa
aaaggatagatttaagaagtactattggtagctgaaaaaccttctgtagctagaaaaatt
gcatccgctttatcaaataaaacatccaaaaaaagataagggaaagttagatatctacct
gtctatgtatatgaaggtagattcaaaggatagaaaaccatttttaaggtaactagtgta
actggtcatgtttatgatttagattttccttaaaagcttaaagaaaattggaatgaaatt
aatcctgtgtaattattttcatcagatacattaaagattccaagcaagcataatattgtg
aggcatttagaatcagaagcaagaaattgttcttacctacttctttggcttgataatgat
aaagaaggagaaaacatatgctttgaagtaaaataaatttgtgaaaaagttatgtgtttc
aaaggagataatgtatagtaagtattgagaacaagattttcttctctgacaaagtaagat
ataataaaagcatttaatggaactactgatcctcctaacgttaacgaatcgaaagctgta
gatgctcgtagaattattgatctaaaaataggtgcttctttcactagatattaaactctt
ttctttagaaataaatatcctgatttaaacaaaaggactatttcttttggtccatgctag
acaccaacgcttgggttttgtgtggaaagagaggattaaatcaaaaaattcatcccaagt
ttactctataaagtaaagttaacactttagggaagtgataataaaacttaaatgttagct
tatagtgaacaaaaagaaacactttctaaagaaaaagcttaatacatattctaaagtatt
aaacttgaaaaacacatttaaatagtatctgtttcatctgagactttagtagaagaatgc
ccagttggtctaaatacagttgaaatgctgaaagctgcatcaagtagcttgaatatgagt
ccacaacaaactatggatgctgctgaaaatctatatttaaaaggatttatcacatatcct
agaacagagtcaacggcttattcaagctcatttaatttcaaaaaagttttgtcaagtcta
tagcaagatatagaatatgggaaattcgcataaaatctacttaatgatggttatataata
ccacaaaaaggaaatgatacggaagatcatccacctattactccaacttcaaactatcca
agaccagaaaatgagggtttaataagcccataagaaaaataattatatgattacatttca
aaacatttcatagcaagcttgtacgatgattatgagtataagaaattaaacataacatgt
caagtgaaaaattactaatttatctctgaagctattagagtagaaaaataaggatataca
aaagttattaagtcaacttaactcgattaaaacatcatctaaattgatgtaaagtaaagt
agtaaattctaaataaaaaacataagtattgaagaagaatattcatctcctcctcgttat
ttatcagaatctgagcttattgatttaatgtcaaaaaattctattggtactgatgcctca
atacctactcatatacaaaatattgttgatagaaaatatgttgaaattgatcaaaaaaat
agaaccttaataccaacataattaggaagatctattatagatggttatagaaaaatagac
gaagaacttgtttcaccataaattagagcttaaattgaaaattcagttaattagattgct
aaaggtgataaggaattttcttaggtattaaatgaatcattaggtttattttaaaataaa
tacatcaattttgtttataatattaaaaatatggataatttagtcggattattctgcaaa
acttataaagaagtactttagacagcaaaacctctaagtaaatgcggtttttgttaaagc
atcatgaaatttatagaataatctgaataagtggtttgtcaaaaatgtgatattaaattt
tatttgcctaagagtggagatttaaaaataagcgaagataagatttgccttaaagataat
ttttaaatcatctaattcacatcttaaaactcaaatgaaggtgtaattgatatctgtcca
aattgttactcagattaattttacagaaagcaaaaaaaatactaattatga |