Tetrahymena thermophila: TTHERM_00502610
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Entry
TTHERM_00502610 CDS
T01020
Name
(RefSeq) class I histone deacetylase family protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tet
Tetrahymena thermophila
Pathway
tet03082
ATP-dependent chromatin remodeling
tet03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TTHERM_00502610
03083 Polycomb repressive complex
TTHERM_00502610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tet03036
]
TTHERM_00502610
Enzymes [BR:
tet01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
TTHERM_00502610
Chromosome and associated proteins [BR:
tet03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
TTHERM_00502610
HDAC complexes
Sin3A-HDAC complex
TTHERM_00502610
BRAF-HDAC complex
TTHERM_00502610
REST complex
TTHERM_00502610
SHIP complex
TTHERM_00502610
MiDAC complex
TTHERM_00502610
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
TTHERM_00502610
Heterochromatin formation proteins
Other heterochromatin formation proteins
TTHERM_00502610
Chromatin remodeling factors
NuRD complex
TTHERM_00502610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
7827202
NCBI-ProteinID:
XP_001022315
TGD:
TTHERM_00502610
UniProt:
I7LWK7
LinkDB
All DBs
AA seq
456 aa
AA seq
DB search
MEDDIRTIYEGKRISYFYNPEIGKFYYSKDHPMKPKRVAMAHSLIQNFGLYKDLDVYTAR
QATFEEMIKFHDIEYINYLQNYVSNGWTQELKKLKQDPLINLESSYHINNPKKRQTSKVG
DTSDCPGFEGLYNFCQISAGGSLDCASMIINQQSDIAINWGGGLHHAKKKEASGFCYVND
IVLCALELLKYYPRVIYIDIDVHHGDGVEEAFFLTNRVMTVSFHEYGDDFFPGSGSLNSI
GDGPGKYHAINVPLRPGINDETFEQVFKDVMKKVMEVYRPNVILLQCGADSLAYDKLGHF
NLSTKGHGKAVEYMKSFGIPLILMGGGGYNVPNVARCWAYETSICVGNKIDGNIPITEPF
YDYFGPDHKLHVTPKNNVDNKNTKDELHQKVSTVHEYLRQIESAPSMAFHHTPDNSKFAE
EEQNIDEEFDYDMDDEELERYFKQKEKPIIMNNRYI
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgatattagaacaatttatgaagggaaaagaattagttatttctataatcct
gaaataggaaagttttactacagcaaagatcaccctatgaaaccaaaaagagttgctatg
gcacattctttaatttaaaattttggtctgtataaagacttagatgtttacactgctcgt
taagctacttttgaagaaatgatcaaatttcacgatatagaatatattaattatctacaa
aattatgttagtaatggttggacataagagctaaaaaagctgaaacaagatcccttaata
aatttagaatcttcataccatataaataaccctaaaaaaagataaacaagcaaagtagga
gatacttctgattgcccaggttttgaaggtctttataatttttgttagattagtgctggt
ggttctttagattgcgcatcaatgattataaatcaataatctgatattgctatcaactgg
ggaggtggtttacatcatgcaaagaaaaaagaagctagtggattttgttatgttaatgat
attgttttgtgtgcattagagttattaaagtattatccaagagtaatttatattgatatt
gatgttcatcatggcgatggtgtagaagaagcttttttccttacaaatcgtgtgatgaca
gttagttttcatgaatatggtgatgacttcttcccaggaagtggctctctaaattctatt
ggcgatggaccaggcaaatatcatgctattaatgtacctttaagaccaggaatcaatgat
gaaacatttgaacaagtatttaaggatgttatgaaaaaagtaatggaagtatatagacct
aatgtaatattgctataatgcggagctgattcattagcatatgataagctaggacacttc
aatttatcaacaaaagggcatggaaaagctgtagaatatatgaaaagctttggtattcct
ctaatattaatgggaggtggtggttataatgtaccaaatgttgcaagatgctgggcttat
gagacatctatttgtgttggaaataaaattgatggaaatattcctattactgagccgttt
tatgactattttggtccagatcataaactccatgttactcctaaaaataatgtggataat
aaaaataccaaggatgagctccattagaaggtttcaaccgttcatgaatatttaagataa
atagaaagtgcaccttctatggcattccatcacacccctgataatagtaaatttgcagaa
gaagaataaaatatagatgaagaatttgattatgatatggatgatgaagagttagaaaga
tattttaaatagaaagaaaaacctattataatgaataatagatatatttga
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