Tetrahymena thermophila: TTHERM_00529620
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Entry
TTHERM_00529620 CDS
T01020
Name
(RefSeq) DNA repair helicase Rad25
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
tet
Tetrahymena thermophila
Pathway
tet03022
Basal transcription factors
tet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TTHERM_00529620
09124 Replication and repair
03420 Nucleotide excision repair
TTHERM_00529620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tet03021
]
TTHERM_00529620
03400 DNA repair and recombination proteins [BR:
tet03400
]
TTHERM_00529620
Enzymes [BR:
tet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TTHERM_00529620
Transcription machinery [BR:
tet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TTHERM_00529620
DNA repair and recombination proteins [BR:
tet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TTHERM_00529620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C_3
Helicase_C
SNF2-rel_dom
DEAD
AAA_34
Methyltransf_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
7837824
NCBI-ProteinID:
XP_001032673
TGD:
TTHERM_00529620
UniProt:
I7LTC8
LinkDB
All DBs
AA seq
832 aa
AA seq
DB search
MADKKVNPKSREQSKRLKSNSQKQNQNGKQQKNEEGDDGLFGQKQGKAQVEGNQFQQFYD
YSTLELKDDYRERPILICPDGIIFLETFNPLYRVAYQFLISIGEPVQRPLSMHKFTLTKY
SLYTAMVLQYEPKDIILCLEKLSKNKKIPKEVERYITENTQNYGAARLFLDDSSYYLDID
SQVWTSIIERNPHIKDLVSQTQFNFDNIINQNKELRDIQKDLQSFFQNIKTENNQQSSKK
NQKMIVEDEQDDGIPDKKNKLMKNGDSSIANYDDEDEEDSDDGDDDFVYNFIMNNKTKRS
FKRIQIIGDHFEVTKAVINCSVPLIQEYDFENKSFKQLEIELKPKIKVRYYQERALKNIF
IQKKARSGLIILPCGAGKTIVGVIAIERIKQSTVIICDSDVSVDQWRDELERWTTINKNK
IVRLTGRIVDEWPTRTTDEPIIVITTYYMLVKKREDLPPTQIAQKSKKRQYIDSMKERKW
GVCVIDEVHKLPANTFQNVLKQYKFHFKLGLTATPYREDEKIINLFYMIGPKLYEENWYD
LVSQGFLAKPYCVEIRCEMSQLWMSEYNKKDLKTGKNYYRGPQRELIHTSNPRKFKTLEY
LIKVHEERGDKILVFCDRPMIIDYYGNILKYPVIYGDVSQDERKKIFNLFKVSNQINTIF
LSRVGDTAIDLPQANVGIQIGMHFKSRRQEVQRLGRIMRAKENYDGQYNAFWYTLVSKGT
DETSYCLARQKCLINQGFKYEIIDEKDLPYSQNPQKFKWMSQLDESDYLYTLLMNSEQNQ
QNGKMSSEEESSSGDSSGSDSEESEGHFNITTKAANPLQNLALYKETQLNKY
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaaaggttaatccaaaatctagagaataaagtaaaagattaaagtcaaac
tcataaaaataaaattaaaatggcaaataataaaagaatgaagaaggagatgatggctta
tttggctaaaaataaggaaaagcacaagtagaaggaaattaatttcaataattttatgat
tactctactctagaattaaaagatgattacagagaaagacctattttgatatgtccagat
ggaataatatttttagaaacttttaatcctctttacagggttgcctattaatttttaatt
tctattggagagcctgtgtaaagacctctctcaatgcataaatttaccttgactaagtat
tcactttatactgcgatggttttatagtatgaacctaaagatataattctgtgtctcgaa
aagcttagtaagaacaaaaaaattcctaaagaagtagaaagatatattactgaaaataca
taaaactatggagctgctagactatttttagacgacagtagttattacttagatatagat
tcttaggtatggacaagtataatagaaagaaatccacatataaaagacctagtttcacaa
acataatttaactttgataatattataaactaaaataaagaattgagggatatttaaaaa
gatctgcaaagcttcttttaaaatataaaaacagaaaacaattaataatcttcaaaaaaa
aactagaaaatgattgttgaagatgagcaagatgatggaattccagataaaaaaaataaa
ttaatgaaaaacggtgatagcagtattgctaattatgatgacgaagatgaagaagattct
gatgatggtgatgatgattttgtttataatttcataatgaataataaaacaaaacggtct
tttaaacgtatttaaattattggagatcattttgaggttactaaagctgttattaactgt
agtgttcctctgatttaagaatatgatttcgaaaacaaaagcttcaaataactagaaatt
gaattaaagccaaaaataaaggtgagatattaccaagaaagagctttaaaaaatatattt
atatagaagaaagctcgttctggattgataattcttccttgtggtgcagggaaaacaatt
gttggagttattgctatcgaaaggataaaataaagtacagtaattatttgtgactctgat
gtttctgtggattaatggagagatgaacttgagagatggactacaattaataaaaacaaa
atagttagattaactggtagaatagtggatgaatggcctactagaactacagatgagcct
attattgtgattacaacatattatatgcttgtaaaaaagcgtgaagatcttcctccaact
taaattgcttaaaagagcaaaaagagataatacatagactcaatgaaggaaagaaaatgg
ggagtttgtgtgattgatgaagtgcataaattgccagcaaatactttttaaaatgtactt
aagcagtataaattccactttaaactaggtctcactgctactccttacagagaagatgaa
aagattattaatttattttatatgataggacctaagttgtatgaagaaaattggtatgat
ttagttagttaaggatttttagctaaaccctactgtgtagaaattagatgtgaaatgtcg
tagctctggatgagcgagtataataagaaagatttaaagacaggtaaaaattactacaga
gggccataaagagagttaatacatacaagtaacccaagaaaatttaagactcttgagtat
ctcataaaagttcatgaagaaagaggagataaaattctagttttttgtgatagaccaatg
ataatagattattatggaaatattttaaaatatccagttatatatggagatgtatcacaa
gatgagagaaagaaaatatttaatctatttaaagtttcaaactagataaatacaatattt
ctttccagagttggagatacagcaatagatttgcctcaggctaacgttggtatctaaatt
ggaatgcattttaaaagtaggagataagaagtttagaggttaggtagaatcatgagagct
aaagaaaactatgatggttaatataatgctttttggtatacattagtttcaaaaggaact
gatgaaacttcctactgtttagcaaggcaaaaatgtttaataaattaaggtttcaaatat
gaaattattgatgaaaaagatttaccatatagttaaaatccttaaaagtttaagtggatg
tcttaattagatgagtcagattatctttacacattattaatgaattctgaacaaaatcag
caaaatggcaaaatgtcaagtgaagaagaaagctcgagtggtgatagctcaggatcagat
tctgaagaatcagaaggacattttaatatcactacaaaagctgcaaaccctttataaaat
ctagcactttacaaagaaacatagcttaataaatactga
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