Tetrahymena thermophila: TTHERM_00530130
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Entry
TTHERM_00530130 CDS
T01020
Name
(RefSeq) U3 small nucleolar RNA-associated protein, putative
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
tet
Tetrahymena thermophila
Pathway
tet03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TTHERM_00530130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tet03009
]
TTHERM_00530130
Ribosome biogenesis [BR:
tet03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TTHERM_00530130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
UTP15_C
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_Gbeta
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_RFWD3
ASA1
Beta-prop_CAF1B_HIR1
Beta-prop_ACSF4
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Utp13
Beta-prop_NWD2_C
PEP5_VPS11_N
NBCH_WD40
BBS2_Mid
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_WDR41
CFAP251_N
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_LRRK2
Beta-prop_HPS5
KNTC1_N
Beta-prop_SCAP
WDR54
WD_LRWD1
WDR90_beta-prop_4th
Cytochrom_D1
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
CNH
Motif
Other DBs
NCBI-GeneID:
7832122
NCBI-ProteinID:
XP_001032724
TGD:
TTHERM_00530130
UniProt:
I7MCW7
LinkDB
All DBs
AA seq
515 aa
AA seq
DB search
MSSSNYKPLQVKKFAKKAISDTPENKYWKKFKVESSKTYVNAINKVYSGGNDSELIAFTE
GRIVYVYNSKKEEIKQQIERFQDKVTGICFRKEGKMMATAEANGKIKIWEVSKKTLLREF
NAHKKAVNAMDFIGGESYMYSGSDDYQIKLYDIASNEVVRTYVNAHSDYVRSIVSVPNSD
RNVISGGYDGFANLFDFRDKSKKPIRQFNHGVSIEDTTIIPSGFSFATVGGTSVNIWDLR
TGNAIETLNHNLKTITCAKFISNGDRLITSSIDQSMKIYRTDTYQITHQFKFPSPVLSFD
MTQNTKCFAVGMADGVLEIRSNQKKLGEQVDSDEEKDDKEDLGLQIPDFLKYNEAAQRRV
HNFQYFSRGMYDKPTQYDVKYEEKRIKKISKYDKLLKKFQYKTAMMHALENRQNDVVIGL
YEELIQRGEIINAFKNLDDSQLSIVFEFIAKKIANPKFQDVAIHMLNLMFEQYTYESGKY
LESMVDILDEEILTQKLLLQLNGQIDTIVNTSIVE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatcaaattataagcctttacaagtcaaaaagtttgctaagaaagctattagt
gatactccagaaaacaaatactggaagaagtttaaggttgaaagttccaagacttatgta
aatgccattaataaagtatattcaggtggaaatgattctgagttaattgcctttactgaa
ggaagaattgtttatgtttataattcaaagaaggaagagattaaataataaatagaaaga
ttttaagataaagttactggaatttgctttagaaaagaaggaaaaatgatggctactgct
gaagcaaatggtaaaattaaaatatgggaagtctcaaagaaaacattgcttagagaattc
aatgctcacaagaaagcagtaaacgctatggactttattggtggagagtcttatatgtat
tcaggatcagatgattatcaaattaaactctatgatatagcatcaaatgaagtagttaga
acatacgtgaatgctcatagtgattatgtcagaagtatagtttctgttccaaatagtgat
agaaatgttatatctggtggttatgatggctttgcaaacctatttgattttagagataaa
tctaagaaacctattcgttaattcaatcacggagtttctatagaagatactacaattatt
ccttctggtttttcttttgcaactgttggtggaacttcagttaatatttgggatttaaga
acaggtaatgctatcgaaacactaaatcataatttaaagactataacttgtgccaaattt
ataagtaatggtgatagattgataacttcttcaatcgattaaagtatgaaaatatataga
acagatacttactagattactcatcaatttaagttcccttctccagttcttagtttcgat
atgacttaaaacacaaaatgttttgctgttggtatggcagatggtgtattagagataaga
agcaattaaaaaaagttaggagaataagttgattctgatgaagaaaaagatgataaggaa
gatttaggtttataaattcctgactttttaaaatataacgaagcagcataaagaagagtg
cataatttttaatattttagcagaggtatgtatgataagcctacctaatatgatgtaaag
tatgaagaaaaaagaattaaaaaaataagcaagtacgataagcttcttaaaaaattccaa
tataaaaccgccatgatgcacgctttagaaaatcgttaaaatgacgttgttattggatta
tatgaagaattaattcaaaggggtgaaataataaatgcttttaaaaatttagatgattct
taattgagtatagtttttgagtttatagccaaaaaaattgcaaaccctaaattttaagat
gtcgctattcacatgttgaaccttatgtttgaacaatacacttatgaaagtggtaagtac
ttggaaagcatggttgatatacttgacgaagaaattttgacataaaaattgttactataa
ttaaacggataaatagatacaatagttaacactagcattgtggaatga
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