KEGG   Tetrahymena thermophila: TTHERM_00540170
Entry
TTHERM_00540170   CDS       T01020                                 
Name
(RefSeq) WD40 repeat protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
tet  Tetrahymena thermophila
Brite
KEGG Orthology (KO) [BR:tet00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tet03041]
    TTHERM_00540170
Spliceosome [BR:tet03041]
 Complex B
  Other components
   Complex B specific factors
    TTHERM_00540170
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40 WD40_Prp19 WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_2nd EIF3I LisH_TPL Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_SCAP PQQ_2 Beta-prop_NUP159_NUP214 Beta-prop_VPS8 NBCH_WD40 Beta-prop_WDR75_1st Nucleoporin_N Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_Nup120_160 WD40_like Beta-prop_NOL10_N Beta-prop_NWD2_C Beta-prop_IP5PC_F VPS8_N Beta-prop_DCAF12 Ge1_WD40 LisH_WDR26
Other DBs
NCBI-GeneID: 7832534
NCBI-ProteinID: XP_001007942
TGD: TTHERM_00540170
UniProt: I7MHM3
LinkDB
AA seq 514 aa
MSLQFKTEDVVKLMLQFMKENGLVNSLKSLQEETQVSLNVVSNTEQFVENIKEGRWDKVL
NEVQSMKLPGKKLMELYEIVVCELLELGESVAAQFIVKQAVKPAGLFEEFKERALRLDYL
SKKIPIDIRELYQDKYTKEKRRANLASSLLKEVVSAPPSRLLQLLGDALKFQEQSGQLTT
GIKLDLFTGQVPHTEDTEDIPINKVEKVVQFGGESRILCAEFSKNGNYLALGSADGIIEI
WDSVLMKLRSDLNYQKDEQFMFHEEAIHALAFSDDGEILVSGDKAGTLKVWKTQTGKSLK
KIDNGLSESISSLKFGADPSHLIVGYNKNLIRVYGLKSGTVIMEHRSKQEGNINDIFVPS
LEEVISVGTDGFIRVWDSKTGQQHQQIKLPRTENQSANEVEIFNILESRHKKGYFVCEKS
NRLVILDKKTFEITSQYVNDRNEDFSSGSLSAQKRLVYGVTNKGYLYCYRAKDSKIQSFF
QVSQDEVIGIKHHPSRNILVAYTLGGDFLFLKAK
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtctttacaatttaaaacagaagatgtagtaaagcttatgctttaattcatgaaagaa
aatggattagtaaactctttaaagtcattacaagaagaaacataagtttctttaaatgta
gttagtaatactgagtagtttgttgaaaatattaaagaaggtagatgggataaagttcta
aatgaggtataaagcatgaaattacctggaaaaaagttaatggagttatatgaaatagtt
gtttgcgagttattagaattaggagaaagcgttgctgcttaattcattgttaaataggct
gttaaacctgctggacttttcgaagaattcaaagaaagagctttaagattagattatcta
tctaaaaaaataccaattgacattagagaattgtatcaagataaatacacaaaagaaaaa
agaagagctaatcttgctagttcactattaaaggaagttgtttctgcacctccttctcgt
cttttgcagttattaggagatgcattgaaattttaagaacaatcaggatagcttacaact
gggattaaactagacttattcacaggctaagtacctcatactgaagatacagaagatatt
cctatcaataaggtagaaaaggttgttcaatttggaggtgaaagtagaattctatgtgca
gaattcagtaaaaatggaaattatttggcacttggaagcgcagatggcataatagaaata
tgggatagtgtattgatgaaattaagatctgatttaaattattaaaaagacgagcaattt
atgttccacgaagaagcaattcatgcgttagctttttcagatgatggtgaaatattagtt
tcaggtgataaagcgggaacattaaaagtttggaagacatagacaggaaaaagcttaaag
aaaatagataatggcttaagtgaaagcatctcttcacttaagtttggagctgatccatca
catttgatagttggatataataagaatttaataagagtctatggtttaaaaagcggtact
gtcattatggagcatagatcaaaataagaaggaaatataaacgatatatttgtaccttca
ttagaagaggttatttctgttggaactgatggcttcattagagtttgggactctaaaaca
ggctaatagcattaataaattaaattacctcgtacagaaaaccaatctgcaaacgaagta
gaaatatttaatatccttgaatctagacataaaaaaggttactttgtttgtgaaaaaagt
aacagactagtcatcttagataaaaaaacatttgaaataacaagttagtacgtaaacgat
agaaatgaagacttttcttctggttcactatcagcttaaaaaagattagtttatggcgtt
actaataaaggttatttatattgttatcgtgccaaggattctaaaatttaatccttcttt
taagtctcacaagacgaagtaataggcataaaacaccatccatctcgtaatattctagta
gcatatactctaggtggagatttcttgtttttgaaggcaaaatga

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