Tetrahymena thermophila: TTHERM_00569290
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Entry
TTHERM_00569290 CDS
T01020
Name
(RefSeq) DEAD/DEAH-box helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tet
Tetrahymena thermophila
Pathway
tet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TTHERM_00569290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tet03041
]
TTHERM_00569290
03009 Ribosome biogenesis [BR:
tet03009
]
TTHERM_00569290
Enzymes [BR:
tet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TTHERM_00569290
Spliceosome [BR:
tet03041
]
Complex A
U1 snRNP components
U1 related factors
TTHERM_00569290
Complex B
TTHERM_00569290
Ribosome biogenesis [BR:
tet03009
]
Eukaryotic type
Pre-60S particles
Helicases
TTHERM_00569290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
DUF2529
Cas3-like_C_2
HAD_Pex22
Motif
Other DBs
NCBI-GeneID:
7823948
NCBI-ProteinID:
XP_001027635
TGD:
TTHERM_00569290
UniProt:
Q24I45
LinkDB
All DBs
AA seq
711 aa
AA seq
DB search
MWGNSYNNNSSSNGYSNNKSNGYSSSNNNGNSYGTGGKWNDNGVGQNLAAIDWTKENLTT
FQKVFYKESQKIRTEEEIEEFYRQNHISAKSPHGKVPDPFLSWTDTHFPQYIMNEVTHAK
FEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVL
APTRELAMQIERESERFGKSSKLKCACIYGGADKYSQRALLQQGVDVVIATPGRLIDFLE
SETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQTLMFSATWPKNVQNLAQDY
CKNTPVYVQIGKHELAINERIKQIVYVTDQSKKINQLIKQLDCLTQKDKVLIFAQTKKGC
ESMSRILNKEGFKCLAIHGDKAQKDRDYVMNKFKSGECRILIATDVASRGLDVKDVSHVF
NYDFPKVMEDYVHRIGRTGRAGAYGCAVSFLTFEDDKKISREYVQMLHDAKQEIPIDLLD
LANPRYRTQYKTVSSSYYDIKKFNSADTSKPSENQNVSNTANSSDKYTSSSSYNQYKSKK
DEDDKRSRSRSPYKSENNNRWDKYNRTKSPEYRSSNGSSHYNNVNKYSSNSNNNSSSYSK
NQSSTSSSSSYGQNNQSSNLMSKPSSKFSAPTNGSYTNGFSSVQQNSQVQNPFMPINPLP
QPFMYQIPGFNGFPNQGFNNFYTGMVPPPPLPTGAPSQQQNGFAQNTTTSS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtggggaaatagctacaataataatagttctagtaatggatactcaaataacaaaagc
aacggatattcaagcagcaataataatggaaactcctatggaaccggtggcaagtggaat
gataacggagttggttaaaatttggctgcaatcgattggacaaaagaaaatcttactaca
ttttagaaagttttttataaggaaagttagaaaataagaactgaagaagaaatcgaagaa
ttttaccgccagaaccacatctcagccaaatcacctcatggaaaagtacctgaccctttt
ttaagctggacagatactcacttcccttaatatattatgaatgaagttactcacgctaaa
tttgaaaaaccctctcctatttagtctttagcattccctgtagtccttagtggtcacgat
ttgattggtattgcagaaacaggtagtggaaaaactctttccttccttttaccctcaata
gttcatattaatgctcaaccaactgtcaaaaagggagatggtcctatcgtcctcgttctt
gctcctactagagaacttgctatgcaaatcgaaagagagtccgaaagatttggtaaatcc
tctaagcttaaatgtgcttgtatctatggtggtgctgacaaatactcctaaagagcactt
ctccaataaggtgtagatgtagttattgctactcctggtagacttattgactttttagaa
agtgaaactactactttacgtagagttacttatctcgtattagatgaagcagatagaatg
ttagatatgggttttgaaatttaaattagaaaaatcttgggttaaattagacctgatcgt
taaacattgatgttttctgctacctggcctaagaatgtttagaatcttgcttaagattat
tgcaagaatactcccgtttatgttcaaatcggaaaacatgaattagctattaacgaaaga
attaaataaattgtttatgttacagatcaatcaaagaaaatcaatcaacttatcaagcaa
ttagattgtttgacttagaaagataaagtattgattttcgcttaaacaaagaagggatgt
gaaagcatgagtcgtattttgaataaagaaggatttaagtgtcttgctatccatggtgac
aaagcctaaaaagacagagactatgttatgaacaagttcaaaagcggagaatgcagaatc
cttattgctacagacgtagccagtagaggtttggatgttaaggatgtctcccacgtattt
aattacgatttcccaaaggttatggaagactatgtccatagaatcggtagaacaggtaga
gctggagcatatggttgtgcagtatctttccttacttttgaagatgataaaaagatatca
agggaatatgtccaaatgcttcatgacgctaagtaagaaattcccattgatcttcttgat
cttgctaatcccagatacagaacttaatataaaactgtttcctcttcatactatgatatt
aagaaatttaacagtgctgatacttcaaagccttcagaaaatcagaatgtttcaaatact
gcaaatagcagcgacaagtacaccagcagtagcagctacaattaatataaaagcaaaaaa
gatgaagatgacaagagaagtagaagtagaagtccatataaatctgaaaataacaacaga
tgggataaatataatcgcacaaaaagcccagaataccgcagttctaatggatcttctcat
tataacaacgttaacaagtattcttcaaattctaataataattcaagttcatattcaaag
aattaatcctccacatcatcatcttcttcctatggatagaataattaatcatccaattta
atgagtaaaccatctagtaaattctctgctcctacaaatggtagttacacaaatggattt
tcttcagtctaataaaattctcaagtttaaaatccatttatgccaatcaatcctttacct
caaccttttatgtactaaattcctggatttaatggtttccctaatcaaggtttcaataac
ttttacactggtatggttcctcctcctccactccctactggtgctccctcataataataa
aatggatttgcttaaaatacaacaacatcttcttga
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