Tetrahymena thermophila: TTHERM_00584730
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Entry
TTHERM_00584730 CDS
T01020
Name
(RefSeq) 3' exoribonuclease family 1 protein
KO
K12587
exosome complex component MTR3
Organism
tet
Tetrahymena thermophila
Pathway
tet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TTHERM_00584730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_00584730
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TTHERM_00584730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
NPC1_MLD
IL8
Motif
Other DBs
NCBI-GeneID:
7846675
NCBI-ProteinID:
XP_001032580
TGD:
TTHERM_00584730
UniProt:
I7LZU1
LinkDB
All DBs
AA seq
228 aa
AA seq
DB search
MNIKEQITEKQSLLSVRPQNYIQLQQGNSSARCCLQTQDSRIICSIIGPYHGIKVLQQDC
EIKCIINFLNKNDSNMHEETEQDIILKRDLVNMLSEIVNIKQYPKSILQLTFDIIQVNGP
VFPYLVNVACFALSLAGIQILDIFSSAYMGFIGNNLIIDPSDKEFALMNKKLCIVQMKNS
QKIIYLDMNGSLDFEEIQKLLSLGISGCNKISTLMSTLLIEQNAVLSN
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaaagaataaattactgaaaaataatcccttctttctgtaagaccttaaaat
tatatctagttgcaacagggaaattctagtgcaagatgttgcttgcaaacataagattca
agaataatttgctcaataattggaccttatcatggcattaaagttctttaataagattgc
gaaattaagtgcattataaattttctcaataaaaatgactcaaacatgcatgaagagaca
gagtaggatataatattaaagagagatctagttaatatgcttagtgaaattgtgaatatc
aaataatacccaaaaagtattttgcagcttacttttgatataatataagttaatggacca
gtgttcccatatttggttaacgtagcttgctttgctctgtccttagctggaatctaaatt
ttagatatattttcaagcgcctatatgggttttataggaaataatttaattatcgatcct
agcgacaaagagttcgctcttatgaataaaaaattatgtatagtgtaaatgaaaaattcc
caaaagataatttacttggatatgaatggttctttagattttgaagagatttagaagctt
ctttcactaggcattagtggatgtaataaaatatctactttgatgagtacgttgttgata
gagtagaacgcagtgttaagcaattga
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