Tetrahymena thermophila: TTHERM_00584840
Help
Entry
TTHERM_00584840 CDS
T01020
Name
(RefSeq) SWIRM domain protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tet
Tetrahymena thermophila
Pathway
tet03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TTHERM_00584840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tet03021
]
TTHERM_00584840
03036 Chromosome and associated proteins [BR:
tet03036
]
TTHERM_00584840
Transcription machinery [BR:
tet03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
TTHERM_00584840
Chromosome and associated proteins [BR:
tet03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
TTHERM_00584840
PBAF complex
TTHERM_00584840
GBAF(ncBAF) complex
TTHERM_00584840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
SANT_DAMP1_like
DUF6395
Motif
Other DBs
NCBI-GeneID:
7846685
NCBI-ProteinID:
XP_001032590
TGD:
TTHERM_00584840
UniProt:
I7LZU3
LinkDB
All DBs
AA seq
1010 aa
AA seq
DB search
MKQKKNQIVINLLKLPNNSYQVIDQEQEDTKPSQQQTSSSKKGGKSQVSKQQSQQPPLSP
ESSNPIIPQNPPPTNLSLSAQQTPQTSQNQSVQQNSQQANSQIANQQSQPQNSMQGGSNL
QAPQAQVNQQVQQAQPPVQQPVAPQVQQPPKANPTFIPTAAPPSLIIRGEENSKDIFPYT
SFAQEKYHQSMGNGGQNMGENKSEKSQKKYQVVLPSCSHWFEMEKIHQIEKESLPEFFQG
KPSKTPEIYKRYRNFIVALYRENPRVYLTATACRRNLAGDVCAILRVHAFLEHWGIINFN
CDPKLTPQSILLSKPTLANQSIYKFTNQSKKIDLLDQDRDLFQEGGEGDLVFNSIKLLSK
NQRPICDFCGVICGLVWFQQKQVQENQPCMVLCIKCYTEGNYPSFLSDRDFEKSDLINKL
SSNDSKQNLSQRPWTPQETHKLLEKIEEYKENWDEIVKSLDGRTREEIILHFLRLPLKNI
SQVRLFENEDDNNIGRQPYEEIADDEPTVFSDFSNPLIQHIAIFKSLLDKHKQKKQSIKA
SAKSSQPQKIEQKEENVEGGTNSQIKEEDEIQEEQKQQNQSKEGQDMEVEIAEQAPSQSA
VNGVAKGETVIQEEVEEQVQVQDSLKKKEDKRLGLIEEVSNSNADDLLEIENITKERAKK
LQEREESKIKKLVQSLIYCQLSKLESKLNYLEEYEKLIWYERNQLEVTQSNHIAETVSLA
YRRNEFNKEFTRTYQEQHRRQMNQQQQPGMPPVPFQNQGQQVPPIAPITGTSPSNQAQQQ
QYPQQNVPNSQPVNASGYQQQYPQNQGGSQQNIPYAPNQAYHKPPAQQYGAPGYQQQPPI
QNPPIQPIQQQQQAQIPNTQQNYQHYPQGIQNQGGYYGNPQRGLSQESTPTNSNPMLHQN
PQQVLQTAPVNQAPSSQSIIGGPTGQHNLSSQPQIPVQAPPVPQGQYDSSQGMNIEEQNY
FSQNDQQEPINNLGDYPQQTEPIAEYTQADQGYQQDYSQQMYDQTEKIDQ
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaaataaaaaaaaaatcagatagttataaatttgttaaagttacccaacaattcatac
taggttatcgattaagaacaagaagatacaaaacctagtcagcagcaaacatcctcatca
aagaaaggtggaaaaagtcaagtatcaaagtagtagtcttagtaacctcctctttctcct
gaatctagcaatccaattattccttaaaatcctcctccaacaaatctttctctatcagct
taataaactccttaaacaagctaaaatcaatctgtataataaaattcttaataagctaat
tcttaaattgctaatcagtaatcataaccataaaattccatgcaaggaggatctaattta
caagctccttaagcttaagttaattaataggtacagtaagcatagcctcctgttcaataa
ccagttgcaccttaggtataatagccacctaaagcaaatccaacatttattcctactgca
gctcctcctagtttaattatcagaggtgaagaaaattcaaaggatattttcccttatact
tcttttgcacaagaaaagtatcattaaagcatgggaaacggtggttaaaatatgggagaa
aataagtcggaaaaatcatagaaaaagtattaagttgtgcttccttcttgctctcactgg
tttgaaatggaaaagattcatcaaattgaaaaggagagtcttcctgaatttttctaagga
aaaccttctaaaactcctgaaatatacaagagatacagaaactttatcgtcgccttgtat
agagaaaatcctagagtttacttgactgctactgcatgcagacgtaacttagctggtgat
gtatgtgctatccttagagtgcatgcctttttagaacattggggtataattaacttcaac
tgtgatcctaaactcactccttaatctattcttctctctaagccaactcttgctaatcaa
tctatctacaaattcacaaactaatcaaagaagatagacttactagattaagacagggat
ctgttttaggaaggaggtgaaggagatttagtatttaattctattaaattactatcaaaa
aatcaaagacccatttgtgatttttgcggagttatttgtggtttagtgtggttctaataa
aagtaagtttaagaaaactaaccttgtatggttctttgcataaaatgttacaccgaagga
aactatcccagttttttgagtgatagagactttgagaaatcagatttaataaataaactt
tctagcaatgattctaagcaaaatctctcttagagaccttggactccataagaaactcat
aaacttcttgaaaaaatcgaagaatataaggagaattgggatgaaatcgtaaagtctctt
gatggccgtacaagagaagaaatcatccttcacttccttagacttcctcttaagaatatc
tcataagtacgcttatttgaaaacgaagatgacaataatattggtagataaccttatgaa
gaaatagcagatgatgaaccaactgttttttctgatttttcaaatcctctaatttagcat
atagcaatctttaaaagcttattagataagcacaaataaaaaaaacaaagtattaaggct
tctgctaaatcaagttaaccttaaaaaattgaataaaaagaagaaaatgtagaaggaggt
acaaatagttagataaaagaagaggatgagatataggaagaataaaaataataaaattaa
agtaaagaaggataagatatggaagtagaaattgcagaataagctccttcataatcagct
gtgaacggcgttgctaagggcgaaactgtaatttaagaagaagtagaagaataagttcaa
gtttaggacagtttaaaaaaaaaagaagataagaggttgggattaattgaagaagttagc
aattcaaacgctgatgatctgttagagattgaaaatatcacaaaagagagagctaaaaag
ctacaagaaagagaagaaagcaaaattaaaaaacttgttcaaagtttgatttattgttaa
ttgagtaaattagagagcaaattaaattacttagaagagtatgaaaagctaatttggtat
gaacgtaactaactagaagtcacacaaagtaatcacattgcagaaacagttagtcttgct
tatcgcagaaatgaattcaataaagaattcacaagaacatatcaagaataacacagaaga
taaatgaattagtagtagcaacctggaatgccaccagtaccattttaaaatcaaggataa
taagtacctcctattgcaccaattactggaacatctccatctaattaggcataacaataa
taatatccttaataaaatgttcccaatagctaaccggtaaatgcaagtggctattaatag
taatatccttaaaactaaggtggctcctaataaaatattccttatgcccctaatcaagct
tatcataagcctccagcataatagtatggtgctccaggctatcagtaacagcctccaatt
caaaatccaccaatctagcctatttaataataacaataagcacaaatacctaatactcaa
taaaattattaacattatccctaaggtatataaaactagggaggatactatggtaatcct
taaagaggtttaagttaagaatcaacaccaacaaacagtaatcctatgcttcactaaaat
ccatagtaagtgctttaaactgctccagtaaactaagctccaagctcccaaagcataatt
ggtggtcctactggataacacaatttaagcagttaaccataaatcccagtctaagcacct
cctgtaccataagggcaatatgatagtagctaaggaatgaatatagaagaataaaactat
tttagttaaaatgattaataagaaccaattaataatttaggagattatccctaataaaca
gagccaattgctgaatacacataagctgattaaggttactagcaagattattcccaataa
atgtatgattaaactgaaaaaattgattagtga
DBGET
integrated database retrieval system
