Tetrahymena thermophila: TTHERM_00590080
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Entry
TTHERM_00590080 CDS
T01020
Name
(RefSeq) pre-mRNA cleavage complex II protein Clp1
KO
K06947
polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
Organism
tet
Tetrahymena thermophila
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tet03009
]
TTHERM_00590080
Ribosome biogenesis [BR:
tet03009
]
Eukaryotic type
Pre-60S particles
Kinases
TTHERM_00590080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Cupin_NOL9
Motif
Other DBs
NCBI-GeneID:
7831818
NCBI-ProteinID:
XP_001019916
TGD:
TTHERM_00590080
UniProt:
I7LVT2
LinkDB
All DBs
AA seq
723 aa
AA seq
DB search
MKYLKQVYAISSGTRRYRKLKALQFYANLQKNGRIDDSFEIAKRKKNANSQKKPAKKAQQ
SLEEFLEEHDVDDSFELAKKHYKSKKEETKKQAASVEKAITKKEKKQKKQDSKNEFLSSD
SDLELIQEIENGSNLKKEKVEEQDFSQHIMELPHGDKLVFVQNKQKVIFTGEFEVCCLYG
QVHVNGLSLSSKDVSDKQKVFMHKASSLLKNSLLSFDTVSRDSTISDSKNASKLLEIINH
NVILINGKQDCDKIIDKICENFDEIQQKFTKGFSNILYIHHTKVLNHQLIPFKIINVLTT
AKQFSSTQNYIQWTEKQQNFVEDAVKSFTNTKNQSNDVKSMLICGTKNCGKSMFTLYSIN
RLLDNFDRICVLDTDLGQSLFHFPGTVNLFSMSKKDIHLSNLTHIHFIKPVLSIYVGEYS
PQYFIQQYIAGIKKCFKFYQEYFRNCPLIVNTHGYITNIGELLLYEIQDIIEPKFIGLLS
TNEQLIQHLTNSNTRLERLSLTTKSKDMPNFKSRVEDITNPSFEANKVKVNEAKRHRKDD
IIFQYLTNQVKLDNTYPFQNLYSSQYGQLCLQKPFEAPLNSIKYYLLETQTQIEGSNDIA
KHFNCSIVALFDQSFSFSNTTTNCIGFAFVRDIDLKKNTIEIITSQSIINDLPRVSTFIK
SNEMAFSKRFYLQNQHSYNEISELTYDVNGDFSSKRTLDVPFVLPKSSGLGNISFRSRVS
NRK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatttaaaataggtttatgcaatttcttctggaaccagaagatacagaaaactt
aaagctctttagttctatgctaatttacagaagaatggacgtatagatgatagttttgaa
atagctaagaggaaaaaaaatgcaaattcatagaaaaaaccagctaagaaagctcaataa
tctttagaagaatttctcgaagaacatgatgtagatgatagctttgaattagccaaaaag
cattacaaaagtaagaaggaagagacaaaaaaataagcagcaagcgtcgaaaaggcgatt
accaaaaaagaaaaaaagcagaaaaaataagattctaaaaacgagtttctttcttcagat
tcagatttagagttaatttaagagattgaaaatggtagcaatttaaaaaaagaaaaagtt
gaagaataggatttttcataacatattatggaactacctcatggggataagttagtattc
gtataaaataaataaaaagtcatattcacaggagagtttgaagtttgctgcttatacggc
taagtacacgttaatggcttgagtttatcaagcaaagatgtttctgataaataaaaagta
ttcatgcacaaagcaagttctttattaaaaaatagtttgctttcttttgacactgtttct
cgtgattctactatttcagactcaaagaatgcatctaaattattagaaataataaaccac
aatgttattttgattaatggaaagcaagattgtgataaaattattgataagatttgtgaa
aattttgatgaaatctaataaaagtttactaaaggattcagtaatattttatacattcat
cacactaaagttctcaatcatcagcttattcctttcaaaatcattaatgttttgaccact
gctaagcaattttcttctacttaaaactatatctaatggacagaaaagtaacaaaacttt
gttgaagatgctgttaaatctttcaccaatacaaaaaactaatcaaatgatgttaaaagt
atgttgatctgtggtactaaaaattgtggtaaaagtatgttcactttatacagcataaac
agacttttggataactttgatagaatatgtgttttagatacagatttaggttaaagttta
ttccactttccaggaactgtaaatttgtttagtatgagcaaaaaagatatccatttgtct
aacttgactcatatccatttcattaagcctgtattaagtatatatgtaggagaatatagt
ccttagtattttattcagtaatatattgcaggtataaagaaatgctttaaattctattaa
gagtattttagaaattgtcctcttatagtaaatactcacggatatatcacaaatattgga
gaattgctgctttatgaaatttaagatattattgaaccaaaattcataggtttacttagc
acaaatgaatagttgattcaacacttaaccaatagcaatactagattagaaagactttct
ctaacaacaaaatcgaaagatatgcctaacttcaaatcaagagttgaggatattactaat
cccagctttgaagctaataaagtaaaggtaaatgaagctaagagacacagaaaagatgac
attattttctaatatttaacaaattaagttaaacttgataatacttatcctttctagaat
ttatattcatctcaatatggttaattatgtctttaaaaaccttttgaagctccattgaac
tcaattaaatactatttgttggaaacttaaacttaaatcgaaggtagcaatgacattgca
aaacattttaattgctctattgttgctttgtttgattagtcattttcttttagtaacaca
actactaattgtattggatttgcatttgttagagatatagatcttaagaagaacactatt
gaaatcatcacaagctaatcgattattaatgatttaccaagagtttcaacatttataaaa
tcaaatgagatggcattttctaagcgtttctacctgcaaaattaacattcttataatgaa
atatcagaactcacttatgatgtaaatggtgatttttcttctaagagaacattagatgtt
ccttttgttttacctaaatcaagtggtttaggaaatatctcatttagatcaagagtttca
aatagaaaatga
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