KEGG   Tetrahymena thermophila: TTHERM_00649100
Entry
TTHERM_00649100   CDS       T01020                                 
Name
(RefSeq) U2 snRNP auxiliary factor, small subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
tet  Tetrahymena thermophila
Pathway
tet03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TTHERM_00649100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tet03041]
    TTHERM_00649100
Spliceosome [BR:tet03041]
 Complex A
  U2 snRNP components
   U2 related factors
    TTHERM_00649100
 Complex B
    TTHERM_00649100
SSDB
Motif
Pfam: zf-CCCH RRM_1 Thr_dehydrat_C DUF1523
Other DBs
NCBI-GeneID: 7841647
NCBI-ProteinID: XP_001032304
TGD: TTHERM_00649100
UniProt: I7M685
LinkDB
AA seq 433 aa
MFDFLFVCFFERGKKKEKREKYQYNYLIIKEKQREKTQILEKRQKKEVYRQYLNKLSQGI
NFSQLAYQQRKAKKASKVVKVSQQQKQQGQQQKQVNKQVQVLEMAEKLSRMYGTEEDKVN
CPFYFKIGACRYENKCLRIHNRPSESQTILIKHMYQNSPTELALAQGNRVSEEEAQKALN
HYEEFYEEVFLELASYGEIDDLIICDNIGDHMKGNVYVKYVRESEALKCLMSLKTRYYDK
QQLQPEFSPVTDFSNAKCKQYIEGQCKRSGYCNYIHSKPIGRPFRRSLFRQMYEEHPEYK
NRSRSRSRSDDDERSKKKRKDKERSEKHEKDSKKKHSRSRSSHKKHKKDKDKKKKKSRSH
SKHSKSASPGYKNSEERRADIAKWGEEDDEEDMKVNASGSVNNNGTTSNNEQSDSNNKQG
THDYLAQLVKPQN
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgtttgattttttatttgtttgtttctttgagaggggaaagaaaaaagagaaaagagaa
aaatattaatataattatttaataatcaaagaaaagtaaagagaaaagacttaaatctta
gaaaagcggtagaaaaaggaagtctatagacaatatctaaataaactaagttaaggtata
aattttagttagctagcttattagtaaaggaaagcaaagaaagcaagtaaggtagtaaaa
gttagttagtagtagaagtagtaaggttaatagtaaaagtaagtaaataagtaagtttaa
gttttagaaatggctgagaaattaagtcgtatgtatggtacagaagaagacaaggtcaat
tgtcccttctactttaaaattggtgcttgcagatatgaaaataaatgtctcagaatccac
aacagaccctctgagagttagactatcttgattaagcacatgtactagaactcccccact
gagttggctttggcttagggtaatagagtcagcgaagaagaagcttagaaggctttgaat
cactacgaagaattttatgaggaagtctttttggagttagcaagttacggagaaattgat
gacttgatcatttgtgataacatcggtgatcacatgaaaggaaacgtttacgttaaatat
gttagggaaagcgaagctcttaagtgcttgatgtccttaaagactcgttattacgacaag
caacagctccaacctgaattctctcccgttactgatttctctaatgcaaaatgcaaacaa
tatattgaaggtcagtgcaaaagaagtggatactgtaattacattcactctaagcctatc
ggtagaccattcagaagatcccttttcagataaatgtacgaagagcatcctgaatacaag
aacaggtctcgctctcgctctagatcagatgatgatgagagatctaaaaagaaaagaaag
gataaggaaagatctgaaaaacatgaaaaagactccaaaaagaagcattctcgttccaga
agctcccataaaaagcacaagaaagataaagataaaaagaagaagaagtctagatctcac
tccaagcattctaagtcagcttctcctggctacaaaaactctgaagaaagaagagctgat
atcgcaaagtggggcgaggaagatgatgaagaagacatgaaagtcaatgcaagcggttca
gtcaacaataatggaaccaccagcaataacgaataaagcgacagcaataacaagcaaggc
actcacgattatttagcctagcttgttaagccatagaattga

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