| Entry |
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| Name |
(RefSeq) class I histone deacetylase family protein
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| KO |
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| Organism |
tet Tetrahymena thermophila
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| Pathway |
| tet03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:tet00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TTHERM_00663829
03083 Polycomb repressive complex
TTHERM_00663829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:tet03036]
TTHERM_00663829
Enzymes [BR:tet01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
TTHERM_00663829
Chromosome and associated proteins [BR:tet03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
TTHERM_00663829
HDAC complexes
Sin3A-HDAC complex
TTHERM_00663829
BRAF-HDAC complex
TTHERM_00663829
REST complex
TTHERM_00663829
SHIP complex
TTHERM_00663829
MiDAC complex
TTHERM_00663829
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
TTHERM_00663829
Heterochromatin formation proteins
Other heterochromatin formation proteins
TTHERM_00663829
Chromatin remodeling factors
NuRD complex
TTHERM_00663829
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| AA seq |
472 aa
METKKKVAYFYNNEIGNYNYGKLHLMNPKRISMTHSLIVGYGVYKDLDVYTTREATKEEI
MQFHDQDYVEYLSNYVSSSKIDFLKKNGCSIPLIDEDAKNDSDKKKQYGIDVQADCPGFD
GLYTFSQLSTGGSIDAAHLIINNAADIAINWGGGLHHAKKGEAYGFCYVNDIVICILELL
KVFPRVLYIDIDVHHGDGVEEAFYTTNRVMTVSFHEFGEDFFPGTGGLNSNGEGLGKNYA
VNVPLRPGMDDESYVQLFKNVMNKVMEVYRPDVVVFQTGADSLANDKIGHFNLSIKGHGQ
CLTYMMGFNVPLVVLGGGGYTIQNVSRCWAFETGLLVKKSLNGPIPVDDPFFHLYEKQNV
LHVPIQQVENKNSKEDLNKIQEEIFKQLKDVEAAPGVPFHTVPRTFLYDDEEYFDEHEMD
KNHDYDGNNYDQDKLNDYINGYHQMDIEQNDQNEIIRKSPLLIEKRNKFNHI |
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| NT seq |
1419 nt +upstreamnt +downstreamnt
atggagactaaaaaaaaagtagcatatttttacaataatgaaattggaaattataactat
ggtaagctgcatttgatgaatcctaagagaatttctatgactcactctttgattgttgga
tacggagtttacaaagatcttgatgtttataccacaagagaagcaacaaaagaagaaatt
atgcaatttcatgattaagattatgttgaatacctctctaactatgtttcaagctctaag
atagattttctgaagaaaaatggatgcagtatacctttaatagatgaagatgcaaaaaat
gatagtgataaaaagaagtaatatggtattgatgtataagcggactgcccaggttttgat
ggactctatacttttagtcagctctcaacaggtggctctatcgatgcggctcatttgatc
ataaataatgcagctgatattgctattaactggggaggaggtttgcatcatgcgaaaaaa
ggagaagcatatggattttgctatgtaaacgatatagttatatgtattcttgaactttta
aaagtctttccacgtgttttatatattgatatcgatgttcaccatggtgatggtgttgaa
gaagctttctatacaactaaccgtgtaatgactgtaagttttcatgagtttggtgaggat
ttcttcccagggacaggaggattaaatagcaatggagaaggtttaggtaaaaactatgca
gtgaatgtacctttgagacctggtatggatgacgaaagttatgtttaattatttaaaaat
gtcatgaacaaagttatggaagtatatagacctgatgttgtagtattttaaacaggagct
gatagcttagcaaatgataaaataggtcattttaacctttctataaaaggtcatggatag
tgcttaacatatatgatgggctttaatgtacctcttgtagtattaggaggaggtggatac
actatttaaaatgttagtcgttgttgggcatttgaaacaggactgttagttaaaaaaagt
cttaatggtcccatacctgttgatgaccctttcttccatttatacgaaaaatagaatgtg
ttgcatgtccctatatagtaagtagaaaataaaaatagtaaagaagacttaaataaaatt
taagaagaaatattcaaacagcttaaagatgttgaagctgctcctggagttcccttccac
acagttcctcgcacatttttgtatgatgatgaggaatactttgatgagcatgaaatggat
aaaaatcatgattatgatggaaataactatgattaagataagctcaacgattatattaat
ggctaccactaaatggatattgagtaaaatgattagaatgaaataattagaaagtcacca
ctgctcattgaaaaaagaaataaatttaatcatatttga |
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