KEGG   Tetrahymena thermophila: TTHERM_00700970
Entry
TTHERM_00700970   CDS       T01020                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tet  Tetrahymena thermophila
Pathway
tet03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TTHERM_00700970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tet03041]
    TTHERM_00700970
Spliceosome [BR:tet03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    TTHERM_00700970
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I PRP4 Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_Vps41 Nbas_N Beta-prop_Nup120_160 WD40_RFWD3 BBS2_Mid PIN_9
Other DBs
NCBI-GeneID: 7837884
NCBI-ProteinID: XP_976809
TGD: TTHERM_00700970
UniProt: Q22LQ2
LinkDB
AA seq 545 aa
MSSDKQEERIYYGSLEEQERQRIIDEEKQKQERKQQQASQSAPNSSSDQQQSQQVQTGQL
KSLGGKQLKSLADKDKSQTNVQIEVLELSEHALEEKRRHDENMRKLELQKKASTMIVPTN
DKEVKYRLRQLGHPICYFGENNADRRERLKKVQAEYIMEHGDLPQFIKLEEKQKQNDENE
HFYYPGIKELKEIREEIATYSLLKSSRRVYKSKVGRMEEDPLVEEKKQISSLNRAMKFDV
CVSQFADSSIVLRGAFSPECDLLATAGGSGVSKIWNIPNSDLKCRLEGHLSKVHDIVWNP
ETGSMSHNSFGHLATGSSDTNIRLWTMDPAAELQKSIVLSGHEDRVNRLSFHQTGKYLFS
TSHDMTWRFWDIERQKEIYVQTGHTKGVYANALHPDGSLIFTGDLQGYGMIWDLRTGKGI
LPFSGYHVKGILAADFSENGFQFVTGSEDNTLRVFDIRRRACMHTLPGHLKLISDVKFQK
NGSNYFVSVSYDNTLKLWNAKDFSLAKTYKSHESKITSVTLDQSQKYFATTSLDRKWMLW
EYKDF
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgtcttcagataagcaagaagagagaatctattatggttctcttgaagaataggagaga
caaagaataatagatgaagaaaagcaaaaataagaaagaaaatagcaataagcttctcaa
tctgctcctaatagcagctcagattaataataatcataataagtctaaacaggataatta
aaaagcttgggaggaaagtaattaaaatctttagctgacaaagataagtcacaaacaaat
gtgtagatagaagtattggaattatcagaacatgctctagaagaaaagagaagacatgat
gaaaatatgagaaagttagaacttcaaaaaaaagcatcaactatgattgtacctacaaat
gataaagaagtaaaatatagattgagataattaggtcatcctatttgctactttggtgaa
aataatgctgacagaagagagcgtttgaaaaaggtttaagctgaatatattatggaacac
ggcgatttacctcaatttattaaattagaagaaaagcaaaagtaaaatgatgagaatgaa
catttctactacccaggtattaaagaattgaaagaaattagagaagaaatagctacttac
tctcttcttaagtcttcgcgtagagtctataaatctaaagttggtagaatggaggaagac
ccattagtagaagaaaaaaagcaaattagttctctcaacagagctatgaaatttgatgtt
tgtgttagttaattcgctgattcaagtattgttttaagaggtgctttttctcctgaatgt
gatcttttagcaacagcaggcggttctggagtctccaaaatatggaatattcctaattca
gatttaaaatgcagattagaaggccatcttagtaaggtccatgatattgtttggaatcca
gaaacaggtagtatgagtcataactcttttgggcatttggctacaggatctagtgataca
aatattcgtttatggactatggaccctgctgctgaattataaaaatcaattgttttaagt
ggacatgaagatagagttaatagactcagtttccatcaaacaggaaaatatctcttttct
acttctcacgatatgacttggcgtttttgggacatcgagcgtcagaaagaaatttacgta
taaactggtcatactaaaggagtatatgctaatgcacttcatcctgatggatctcttatt
tttacaggagatctctaaggttatggaatgatttgggatttaagaactggtaaaggtata
ctacctttttcaggttatcatgttaaaggtattttagcagctgatttctctgaaaatggt
ttctaatttgtaactggtagtgaagataatacacttagagtattcgatattagaagaagg
gcttgtatgcatactcttcctggtcatcttaaacttatcagtgatgttaaattttagaaa
aatggaagcaattactttgtctctgttagttatgacaacacactcaaattatggaatgca
aaagacttttcactagccaaaacatataaatcccacgaatctaaaatcacttcagttacc
ttggattaatctcagaagtattttgcaactacatctctagatagaaagtggatgttatgg
gaatataaagatttctga

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