Tetrahymena thermophila: TTHERM_00762900
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Entry
TTHERM_00762900 CDS
T01020
Name
(RefSeq) AAA family ATPase
KO
K10754
replication factor C subunit 1
Organism
tet
Tetrahymena thermophila
Pathway
tet03030
DNA replication
tet03410
Base excision repair
tet03420
Nucleotide excision repair
tet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TTHERM_00762900
03410 Base excision repair
TTHERM_00762900
03420 Nucleotide excision repair
TTHERM_00762900
03430 Mismatch repair
TTHERM_00762900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tet03032
]
TTHERM_00762900
03400 DNA repair and recombination proteins [BR:
tet03400
]
TTHERM_00762900
DNA replication proteins [BR:
tet03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TTHERM_00762900
DNA repair and recombination proteins [BR:
tet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TTHERM_00762900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
AAA_14
AAA_28
RuvB_N
AAA_16
AAA_22
RCF1-5-like_lid
AAA_5
AAA_assoc_2
AAA_11
AAA_18
NPHP3_N
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
7845450
NCBI-ProteinID:
XP_001025348
TGD:
TTHERM_00762900
UniProt:
I7M476
LinkDB
All DBs
AA seq
1230 aa
AA seq
DB search
MSGSKKQQKTLFEVFKGKENNKSVSPKHVDPKKQKLLAKIINKPNQKMQEEEKNTMSKKK
NQKDEILDQKRGRKPSNPIESREQSNSPTPIKNQKKNNKAADHEVEKNKEFTDIQNTQHV
KKQQLKTKTNENYANKSTNNNRDIETEEELTSPKDEIKAKGIKKQNRLMKISEKVKANPK
KQNKKIPILISDQEDSDDESEQGEVEYVDDQVDNLQQNKRVDQMFKNNQKKIEFQSKGKK
EEPEQKQGNSLLAFLQPQDLQQDLENMKINEQDKQDKQDDEINEDEEEIRRLDQLIKLKQ
ESILISDSPIKTNNQVRQKDENQMEIEEAVQQEQEQENSIQEISEEAFVPKNLKNKTFYF
LGQFKEFDIKIIKLAIEDNEGKVINKEKQGKDHYNVIGNKNVSFNDMKNIKEKQFPYQNY
DDFVSLVEKTLGMKIENIITKYKQIQENGEPKQKKDTPIQNINQQQKQQIQTAQTAAFSQ
KVNQQNQKTDEKANKKIQNESQSSLSGLASFLPPSAFIQQDPEIVEDLNENEYHVNDKMI
KSEAYKDQNSKDSNQADSEKQNMSNSVPFFTKKDLKKPQTKAICKIDEEPQIINEINKQE
SMEVEVEYVKKIKNTQKPFMDHHQAQLNKKKQNQENSIHSLWTHKYAPQELNDCVGNEAQ
IKKLENWLVNWENVVVHKQKVQGNWKENPGSRACLISGPPGIGKTSTVRLLAQKYNMNII
EWNASDVRNKNAIETIINPLKDNTVLNFKHEVSSQRSIILMDEVDGMSSGDIGGNQALMK
IIKETKNPIFCVCNDRYSQKLRSLASICFDVRFYKPNKGQIAKRLLEVCRKEGLKSELNH
LEFLAESVNNDIRQALNLLQMQSKKSKDISFKSLVQGLSSFKKDDQVSMSAFEAAKILMT
KVEFDRKKQISQKVDLFFLDYELVPMLIHENYLSTFQSKEYNRTSVQELERIADATCAMA
ESDLLQDSIRSGGNWSLLQNVGFLTSVYVPQQVCSKCNTYPQMTQHLGKFSSQRKTSRLI
RQLRMQLAQNISGNRQAVQFDYINPLMELILYQLENNGKQGVDNVISIMEEYNITPDLLK
EHFITVPYKSDFEQRLKDIPTTIKTNLTKTYNKRFKDDVKPDKKTKKSEDEEHHVKYDDV
LGEIDEVEIDEEEQEDQQQQQQKEDEETKNNIKESKQSKETQKKSDINKQQLEEEKKAQT
IKSTKTSTKEVKSQPEQKNNLKSFFLKNKK
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatctaaaaaataataaaaaactcttttcgaagtatttaaaggtaaagaaaac
aataaaagtgtgtctcctaaacatgtagatcctaaaaaataaaaacttttagctaaaata
ataaataaaccgaattaaaaaatgtaagaggaagaaaagaacactatgagtaagaaaaag
aattaaaaagatgaaattttagattaaaaaagaggtagaaaaccaagtaatcctatagaa
agtagagaacaatctaatagcccgactccaatcaaaaactaaaaaaagaataataaagct
gctgatcatgaggtagaaaagaataaagaattcacagatatataaaatacctaacatgtt
aaaaaacaataattaaaaaccaaaacaaatgaaaattatgcaaacaaatcaactaataat
aatagagatatagaaacagaagaagaattaacttctcctaaagatgaaataaaagcgaaa
ggtattaaaaaataaaatagattaatgaaaatttcagaaaaggttaaagctaatccaaag
aaacaaaacaaaaaaataccaatattgatttcagattaggaagattcagatgatgaaagt
gagtaaggagaagtagaatatgtagatgattaagttgataatttataataaaataaacga
gttgattaaatgtttaaaaataattaaaaaaaaattgaattctaatctaaaggaaagaag
gaagagcctgaataaaaataaggaaatagtttgctagcttttttataaccataagattta
taataagatttagaaaatatgaaaattaatgagtaggataagtaggataaataagacgat
gaaataaatgaagatgaggaagaaataaggagattagattaacttatcaaattaaagcaa
gagtctattttgatttcagattctccaattaaaactaataatcaagtaagataaaaggat
gaaaattaaatggaaattgaagaagctgtataataagaacaagaataagagaatagcatt
caagaaatatctgaagaagcttttgttccaaaaaatttgaaaaataaaacattttacttt
ttaggataatttaaagaatttgatataaaaataattaaacttgcaattgaagataatgag
ggtaaagtcattaataaggaaaaataaggaaaagatcattataatgttataggtaacaaa
aatgttagttttaatgatatgaaaaatattaaagaaaaataatttccttactaaaattat
gatgattttgtctcattggtagaaaaaacattgggtatgaaaattgaaaatatcataacc
aaatataaataaatttaagagaatggggagccaaaacaaaaaaaagatacccctatataa
aatataaactaatagtaaaagcaataaatctaaacagcataaacagcagctttttcttaa
aaagttaactaataaaattaaaaaactgacgaaaaggcaaataaaaaaatttaaaatgag
agctaatcaagtttatctggtttggcttctttcttacctccttctgcatttatataataa
gatcctgaaatcgttgaagatttaaatgaaaatgaatatcatgttaatgacaaaatgata
aaatctgaagcttacaaagactaaaatagtaaagattctaattaagctgattctgaaaag
caaaatatgtcgaattcagtaccattttttacaaaaaaggaccttaaaaaaccttaaact
aaagctatttgtaaaatagatgaagaaccttaaattataaatgaaataaataaataagaa
agcatggaagttgaagtcgaatatgtaaagaaaatcaaaaatacttaaaaacccttcatg
gatcatcatcaagcataactcaataaaaaaaaataaaatcaagaaaacagtattcattcc
ctttggactcataagtatgctccataagaattaaatgattgtgtaggtaacgaagcttaa
attaaaaaattagaaaactggctagttaattgggaaaatgttgtggttcataagtaaaaa
gttcaaggaaattggaaggaaaatccaggttctcgtgcttgcttaatttcagggccacca
ggtataggtaaaacatctacagtaagattgctagcctaaaaatacaacatgaatataatt
gaatggaatgcttcagatgttagaaataagaatgctattgaaactatcatcaaccctctt
aaagataatacagttttaaactttaaacatgaagtatcttcttaaagatctatcatttta
atggatgaagtcgatggtatgtcttcaggcgatataggtggtaattaagctttgatgaaa
attataaaagagaccaaaaatcctattttctgtgtttgtaatgatagatacagccaaaag
ttgcgttctttagcaagtatttgctttgatgtgagattctataagccaaacaaaggacaa
attgctaaaagattgctcgaagtttgcagaaaagaaggtttaaaatctgagcttaaccat
ttagaatttttagctgaaagtgtgaataatgatatcagacaagctttaaacttgctttag
atgtagtctaaaaaatcaaaagatataagttttaagagtctagtataaggactaagtagt
ttcaaaaaagatgatcaagtatcaatgagtgcttttgaagctgcaaaaattttgatgaca
aaggttgaatttgatagaaagaaataaatatcttaaaaagtcgatttattctttttagat
tatgaattggtgccaatgctaattcatgaaaattacttatctaccttttaatctaaagag
tataatagaactagtgtgcaagaactcgaaagaatagctgatgcaacctgtgctatggct
gagagtgatttactataagactctattagatctggtggaaattggtctttgctacaaaat
gttggttttttgacatcagtgtatgttccacaataggtttgtagtaaatgcaatacttat
cctcaaatgacttagcatttaggaaaattctcttcacagcgtaaaacatctagattaata
agataacttcgtatgcaactagcataaaacataagtggtaatcgctaagcagtctaattt
gattacattaatcctttaatggaacttattttatactagttagaaaataatggaaagcag
ggagttgataatgtgattagcataatggaggaatacaatataactcctgatttgcttaaa
gagcattttattacagtcccatataagtcagacttcgaataaagattaaaggatattcct
acaacaattaaaactaatttaactaaaacatacaacaaaagattcaaagatgatgtaaag
cctgataagaaaactaaaaaaagtgaagatgaagagcatcatgtaaaatacgatgatgtg
ttaggtgaaatagatgaagttgagattgatgaagaagaataagaagaccagcaataataa
taataaaaagaagatgaagaaacaaaaaataacattaaagaaagtaaatagagcaaagag
actcaaaaaaaatctgacataaataaataataattagaggaggaaaagaaagctcaaaca
attaaaagtacaaaaacttcaacaaaagaagttaaaagttaacctgaataaaaaaataat
ttaaaatcattctttttaaaaaataaaaaatga
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integrated database retrieval system
