Tetrahymena thermophila: TTHERM_00773790
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Entry
TTHERM_00773790 CDS
T01020
Name
(RefSeq) DNA repair protein RAD50, putative
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tet
Tetrahymena thermophila
Pathway
tet03440
Homologous recombination
tet03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TTHERM_00773790
03450 Non-homologous end-joining
TTHERM_00773790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tet03032
]
TTHERM_00773790
03400 DNA repair and recombination proteins [BR:
tet03400
]
TTHERM_00773790
DNA replication proteins [BR:
tet03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
TTHERM_00773790
DNA repair and recombination proteins [BR:
tet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
TTHERM_00773790
BRCA1-C complex
TTHERM_00773790
NHEJ (non-homologous end-joining)
MRX complex
TTHERM_00773790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
SbcC_Walker_B
AAA_29
Motif
Other DBs
NCBI-GeneID:
7823703
NCBI-ProteinID:
XP_001031632
TGD:
TTHERM_00773790
UniProt:
I7MFI1
LinkDB
All DBs
AA seq
1303 aa
AA seq
DB search
MSYLKKLGIYGIRSYGDQNSEKYEEIAFFKPLTLILGNNGAGKSTIIECLKLITTGSFPP
NSDKGKTFIKDPRLMGSNESQGSISLIFKAINQKQILVRRLFQVKKEKSGKFTFDSKDAT
IKVRDKNTGKDISVDHKCLEIEKQVPQLLGVSKAVFENVIFCHQDESLWPFGDSATLKSI
FDELFDTKQFTKLQETLHKQQKEIKKEASETKINLQHYKQRYDEAVSQKQLIAKEAEDLL
QATVDLEKMRNEYNLFNKGIEDEETVRIRIENLNKDICNCNWNKNEMEKQQKQILSSCSR
HYFLGEDIDTLKKIQDHLKKENQDLKIKKEEIEESIETEKRDLDKLKYEIENLKSSDKNT
KQVHQDLKNIKQKLNEIMHKSIDSDEIMLKEANQYKDQIESEYKTLSFSLKNSVQEYQDT
IHQTQQNLQKLQVRQAELKEKKKHSQKRIEQLQEEIGKLKSSNTQKNLEESIQLLEVSKK
NSEQYNLKIQEYQDQIDNIRQQNSGLAKQIEIINSQSKMQSKYLELKQMTSQFDEINKTM
EVQQKEYEQYQISQDEHLSEQRKQCMGEISSLKQQKSKLESEISKLEGRIELNEDIETAF
ELKLNQITQTFKESNLLDIIAQDNNADFDTKYQSIKEEIEELKNSIIEKQTCLLIDKQVL
NYCTEKKKCKFCKSDVNEDNISKITKSQEDRSRKAEKDIQERIALKEQKIFEKKQLKKLK
EQYVQYNELRAKQKKNNSEIKEIQIQVKELQEQLQNLVNQLINKEAQLAKLEKAHTIQSE
IIKTQRQIYNLKNKIQKFQVENPELLNIDNQNIIPPEKVEEIHKNYKQNNQRLESLNSLL
IQENNKKANSNASFQQAEVLRKNCQNKLKEEQEQIQRNTKDIKDYEQQNQTSLTELQNIE
KDIESQNKLLQELKKNVSEQTQELQKVQQTYDQSKILIGEYLPKYEKTYTEYKELKQAKG
KQKSKLQENQIAQLEKEYAIKEKSKQQNEEELVKIIEQLKEQTEEFDNLTKGIQYLELGV
SISQVEKELAQNEQLLKEQQAILEKIQQQTRAGYDKIQKIKAFEETCKYRKQALEKNYAE
AIARYDQAEERYCRALVELEVKNGLLKDIQEYLEELDKTLINYHKDKMEQINKCIADTWK
KIYQGQDIVKVEIKAEEAEGRGKKIYNYRIVMFIYDEKDKDLKEIDMKGRCSAGQKVLAS
IIIRLALAEAFTMNCGILALDEPTTNLDKLHAQKLGEQLCELIESRKGQSSFQLIIISHD
KDFIHLMQQRQHCSDFYYVYKENGCSLIERRTYKNALMNKQTD
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacttaaaaaagctaggaatttacggaatcagaagttatggggattaaaacagt
gaaaagtatgaagaaatagccttctttaaacctttaactctgattttaggtaacaacgga
gctggcaagtcaactataatagaatgcttaaaactaatcactactggttcttttcctcca
aactctgacaaaggaaaaacatttattaaggatccaagattgatgggttcaaatgagagt
taggggtcaatttcgttaattttcaaggctattaatcaaaaataaatattagttagaaga
ctattctaggtaaaaaaagaaaagagtggaaaatttacatttgattcgaaagatgctacg
attaaagttagagataagaatacaggaaaggatatctctgtagatcataaatgtttagaa
attgaaaaataagtcccacagttattaggtgttagtaaagctgtttttgaaaatgttatc
ttttgtcactaagatgaaagtctttggccatttggtgacagtgcaacattaaaaagtatt
ttcgatgaacttttcgatactaaacaattcacaaaactttaagaaactttgcataagtaa
cagaaagaaattaaaaaagaagcttcagaaacgaaaattaatttgtagcactacaagcaa
agatatgatgaggctgtttctcagaaatagttgattgcaaaagaagcagaagatttactc
taagctactgtagatcttgaaaaaatgagaaacgaatataatttgtttaataaaggaatt
gaagatgaagaaacagtcagaataaggatagaaaacttaaataaagatatttgcaattgt
aattggaacaaaaatgaaatggaaaaatagtagaaataaatattaagtagctgcagtaga
cactattttttaggtgaagatattgatacactaaaaaaaatataagatcatcttaagaaa
gaaaactaagatttgaagataaagaaagaggaaattgaagaaagtattgaaacagaaaaa
agggatttagataagttgaagtatgaaatagaaaatttgaaatcatcagataagaatact
aaataagttcattaagatctcaaaaacattaaataaaaattaaatgaaattatgcataaa
tctattgattctgatgagattatgctgaaagaggctaaccaatataaagattaaatagaa
tcagaatataaaacattatcattttctttaaaaaactctgtacaggaatatcaagatact
attcactaaacatagcaaaatttacaaaaactttaagtaaggtaagctgaacttaaagaa
aaaaaaaagcactctcaaaagagaattgaatagctttaagaagaaattggaaaactaaaa
tcttcaaacactcaaaaaaatttagaagagtcaatttaattattggaggtgtctaaaaaa
aatagtgaacaatataacttaaagatataagaatactaagactaaatagataatattaga
tagcaaaattctggattagcaaaataaattgaaattattaactcatagtctaaaatgcaa
agtaaatatttagagctaaaataaatgacaagctagtttgatgaaataaataaaactatg
gaggtttagcaaaaagaatacgaataatattaaatttcacaagacgaacatttgagtgag
caaagaaagtaatgcatgggtgaaataagtagcttaaagtagcaaaaatcgaaacttgag
tcagaaatttcgaaattagaaggtagaatagagctaaatgaagacatagaaacagctttt
gaattaaaactaaatcaaataacttaaacttttaaagaaagtaatttactcgatattatt
gcttaagacaataatgcagattttgatacaaaatactaatcaattaaagaagaaatagaa
gaattaaaaaatagcattattgaaaagcaaacttgcttattaattgataaataagttcta
aattattgcactgagaagaaaaagtgcaaattttgtaaaagtgatgttaatgaagataat
atatccaaaataactaaatcctaagaagatagatcaagaaaagcagaaaaagatatacaa
gagcgtattgcccttaaagaataaaaaatatttgagaaaaaataattgaaaaaactcaag
gaatagtacgtttagtataatgaattgagggctaaataaaaaaagaataactctgagatt
aaagagatataaattcaggttaaagaactacaagagcaattataaaatttagtcaattaa
cttattaataaagaagctcaattagctaaactagaaaaagcacatactatttaaagtgaa
atcattaaaacataaagataaatttataacttgaagaataaaattcagaaattttaagtt
gaaaatcctgaattactaaatattgataattaaaatattataccaccagaaaaagttgaa
gaaatccataaaaactataagcaaaataactaaaggttagagtctttgaacagcctgctt
atttaagaaaataacaaaaaagcgaactctaatgctagttttcaataagcagaagtgtta
agaaaaaactgctaaaataagctaaaagaagaacaagagcaaattcaaagaaacacaaaa
gatattaaagattatgaataataaaattaaacatctctcactgaactataaaatattgaa
aaagatatagaatcataaaacaaattattataagagcttaaaaaaaatgtaagtgaataa
acacaagagctttagaaagtttaataaacttacgactaatccaaaatactgattggcgaa
taccttcctaaatacgaaaagacctatacagaatataaagaacttaagcaagccaaagga
aagtaaaaaagtaaattataagaaaattaaatcgcttaattagaaaaggagtatgctatc
aaggaaaaatcgaaataataaaatgaagaagaactagtaaagattatagagtaactgaaa
gaacagactgaagaatttgacaatcttacaaaaggtatctaatatctagaacttggtgtt
tctatatcttaggtggaaaaagagttagctcaaaatgaacaacttctcaaagaatagtaa
gcaattttagagaaaatctaacaataaacgagagcaggatatgataaaatacaaaaaata
aaagcttttgaagaaacctgcaaatatagaaaataagctttagaaaaaaattatgcagag
gcaatagccagatatgatcaggctgaagaaagatattgtagagcactagttgagttagaa
gtaaaaaatggattgctaaaagacatctaagaatacttagaggagcttgataaaacacta
attaactatcataaggataagatggaataaattaataaatgcattgcagatacttggaaa
aaaatttattaaggctaagatattgttaaagttgagatcaaagcagaagaagcagaagga
agaggcaaaaaaatatataactatagaattgttatgtttatctacgacgaaaaggataaa
gatctcaaagagatagatatgaaaggcagatgtagtgctggttaaaaagttcttgcttca
atcattattaggttagcattagctgaagcatttactatgaattgtggtatccttgcactt
gatgagcctacaacaaatcttgataagcttcatgcctaaaaattgggagagcaactatgt
gaacttatagagtccagaaaaggataatcgtctttccaacttatcataatttcacatgat
aaagattttattcatttaatgtagcagagataacattgtagtgacttctactacgtatat
aaggaaaatggatgttctctaattgaaagaagaacttataaaaatgctttgatgaacaag
taaacagattga
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integrated database retrieval system
