KEGG   Tetrahymena thermophila: TTHERM_00829370
Entry
TTHERM_00829370   CDS       T01020                                 
Name
(RefSeq) MMS19 nucleotide excision repair-like protein, putative
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
tet  Tetrahymena thermophila
Brite
KEGG Orthology (KO) [BR:tet00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tet03036]
    TTHERM_00829370
   03400 DNA repair and recombination proteins [BR:tet03400]
    TTHERM_00829370
Chromosome and associated proteins [BR:tet03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    TTHERM_00829370
DNA repair and recombination proteins [BR:tet03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     TTHERM_00829370
SSDB
Motif
Pfam: MMS19_N
Other DBs
NCBI-GeneID: 7830274
NCBI-ProteinID: XP_001013640
TGD: TTHERM_00829370
UniProt: Q23A85
LinkDB
AA seq 1014 aa
MNIEDFLNSFGNKGKNQEEDIEKTIVEFIDNEANDRSVDTKCITKLLIAFQMNQINLFQF
FEKMQFYFVNGREKTRQRATEFIYLFFSRYSGLQMSQEEVESLYLFFLTKLFDVATVKTA
NKVLLELLKNVIKHQEQMKQKIDSKKAGAFKEFKFNLAKQFIEKISDSKFNISQYSQDVR
DSVYINLRFLQENFTESCVELGATYVKVIIESTEDEKDPRCIIKSFKLIRFVLENFSLSM
LKPFLEDIFDNLECYYPIDFQPDPEQDKKYQISPKDLSEALDLCLINKHILQKTLDIINE
KINSSYIDAKLAAMQTYQLVFKNYLPGQLLSSQRKQILNNLIENAQDIEEVELQDKVVDS
IKQYIVFITSTCKSDTNIIENCYYDDLKLVNKHIFKLLEDGLLHHNAALSEKLMKALIPI
NQNMNYTIVNSIVKYFNSRYTNKESIVAQRQLEFVLVILLAAEQEIKHSCDFMLNPFFYL
DEEKEKNLKNILMGEIQNTNDESIQILSLAILMKLAVYGKASKEMDIEFMKVCEDIGITE
AELENYSETVKKCMVEYCYTVNSKLQESQISFLELKLVGLLGQQNMNETVVNGFNSMILN
NTDGWKECFDFIIQHINNRDQQKLINLLLEKVISLNKEYVNKHIYQELTQINNLIIEDKQ
TRSQLKTILSNVIKSDCELTEQEISSFKSLIQKPYESITLFTKLIKKLSKTIEIKDFFIQ
FSQNIQKSDIIKDKNITSFVLSLSKLFGNKIQKYLSNEEYKQFMGVMKSKMIDKNSSEFE
LKLYSRIFRGLLISMNNEAFQLLSQIIQSEIKGESNLSVEFYNTIMNSKNAQVQKSYLFY
SPTYAQRLFNTCVEVFYNKLNSIKNNPAEIQMKNKCYLVLTSTLLVSPFSILKINKSISL
PILIEALTFSSDSQGLESAIKLLTRLINTDLNVIGSSSESLINCLLKLLQQENNSVSCTI
EIIKCLAECIRFEYHLVKRYKKDVIDILDRYLSHKKRPVRRHAVYTVNQWHMII
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgaatattgaagactttttgaatagctttggcaataagggtaaaaattaggaggaagac
attgaaaagacaatagtggagtttattgataatgaagctaatgatagaagtgtcgataca
aagtgtataactaagttgctgattgctttttagatgaatcagattaatcttttttagttt
tttgaaaaaatgtaattttattttgtgaatgggagagagaagacaagacaaagagcaact
gagtttatttatctgttttttagcaggtactcaggtttataaatgtcttaggaggaagta
gaatcgctctatttatttttcttaactaagctgttcgatgttgccacagtgaagactgca
aataaggtgttgctagaattactgaaaaatgtaatcaagcattaggaataaatgaaataa
aaaatagattcaaagaaggctggagcctttaaggaatttaagttcaatttagcaaagcag
tttatagaaaaaatcagtgatagcaagttcaatatttcacaatattcgcaagatgtgaga
gattccgtttacattaatctgaggttcttgcaagagaatttcacagaaagctgcgtagaa
ttgggagcaacatatgtaaaagttattatcgaatctacagaagatgagaaagatccaaga
tgcatcattaagtcattcaaattaataagatttgttttggaaaatttcagtttatctatg
ttgaaaccatttttggaagatatttttgataacttagagtgctattatcctattgatttc
taaccagatccagaataagataaaaagtactagatttctccaaaagatctttccgaagca
cttgatttgtgtctaattaataagcacattttgcaaaaaactttggacatcatcaatgaa
aaaataaactcttcatatatagatgccaagttagccgcaatgcaaacttattaattagtt
tttaaaaactaccttccaggataattgctttcttcttaaagaaaacagatcttgaacaac
ttaatagaaaatgcttaagacatcgaagaagttgaattataagacaaagttgttgactct
atcaaataatatattgtattcattacttctacttgcaaatcagatacaaatattattgaa
aattgttattacgatgatttgaagttagtaaataagcacatttttaaactccttgaagac
ggtcttcttcatcacaatgcagctctttctgagaaattaatgaaagctctgattcccata
aattaaaatatgaattacacaattgtcaactctattgtgaagtactttaatagcagatat
acaaataaggaatcaatagttgcttaaagatagcttgaatttgtcttagtaattttactt
gctgcagaacaagagataaaacactcatgcgattttatgctcaatcccttcttctacctt
gatgaagaaaaagaaaaaaatttaaaaaacatcttgatgggagaaatttaaaatacaaat
gatgaatcaatataaatattatctttagcaattttgatgaaattagctgtttatggcaag
gcatctaaagaaatggatattgaattcatgaaagtttgtgaagacatcggaataacagaa
gcagaattagaaaactactctgaaactgtaaagaaatgtatggttgaatactgctatact
gttaactcaaagctctaagaatctcaaatctcattcttagaattaaaattggttgggtta
cttggttagtaaaacatgaacgaaactgtggttaatggatttaattctatgattttaaat
aatacagatggttggaaagaatgcttcgacttcataatctaacacattaacaaccgcgat
tagcaaaaattaataaatttattattagaaaaagtgatttccctgaacaaagaatatgtc
aataaacacatctactaagaattaacataaataaataatttaattattgaagataaataa
acaagaagctaattaaagactatcctttcaaatgtaattaaaagtgactgtgaattaact
gaataagagatatcctcatttaaatctcttatacaaaagccatatgagagcatcacatta
ttcactaagctcattaaaaagttaagcaaaaccattgaaataaaagattttttcatttaa
ttcagtcaaaatatctaaaaaagtgacataattaaagacaaaaatattacttcctttgtt
ctctctttatcaaagctatttggcaataagatacaaaaatatctttctaatgaggagtac
aaacaattcatgggagtaatgaaaagcaaaatgattgataaaaatagttcagagttcgag
ctaaaattgtattctagaatattcagaggattacttattagtatgaacaatgaagccttc
taacttctttcttagataatttaatcagaaattaaaggagaatctaatttatctgttgaa
ttttacaacacaataatgaactcaaaaaatgcataggtataaaagtcatatctgttctat
tctccaacttatgctcagagacttttcaatacttgtgtggaagtattctacaataaactt
aacagcattaagaacaatccagcagaaatataaatgaaaaacaaatgctatttagtttta
acttcaactttattggtgagtccattttctattctcaagataaataaatcaatcagtcta
ccaattctaattgaagctttaacattttcatccgactcacaaggacttgaaagtgctata
aaattattaactagacttataaatactgacttgaatgttataggtagcagcagtgaaagt
ttgataaattgtttattaaaattgctttagcaagaaaataacagcgtaagttgcaccatc
gaaataataaaatgtctggctgaatgcattcgctttgaatatcatttagtaaaacgctat
aaaaaagacgtaattgacatcttagatagatatttatctcataaaaagagacctgtaaga
agacacgcagtctatactgtcaaccaatggcacatgattatatga

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