Tetrahymena thermophila: TTHERM_00939110
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Entry
TTHERM_00939110 CDS
T01020
Name
(RefSeq) BRCT domain protein
KO
K10754
replication factor C subunit 1
Organism
tet
Tetrahymena thermophila
Pathway
tet03030
DNA replication
tet03410
Base excision repair
tet03420
Nucleotide excision repair
tet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TTHERM_00939110
03410 Base excision repair
TTHERM_00939110
03420 Nucleotide excision repair
TTHERM_00939110
03430 Mismatch repair
TTHERM_00939110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tet03032
]
TTHERM_00939110
03400 DNA repair and recombination proteins [BR:
tet03400
]
TTHERM_00939110
DNA replication proteins [BR:
tet03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TTHERM_00939110
DNA repair and recombination proteins [BR:
tet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TTHERM_00939110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
Rad17
PTCB-BRCT
RuvB_N
AAA_19
AAA_22
AAA_5
AAA_16
AAA_30
RCF1-5-like_lid
AAA_28
Motif
Other DBs
NCBI-GeneID:
7834587
NCBI-ProteinID:
XP_001031085
TGD:
TTHERM_00939110
UniProt:
Q22DN2
LinkDB
All DBs
AA seq
1123 aa
AA seq
DB search
MKKNNQSNSLLKYFSKQDTKTVNNSQNSSKDKDKEKDSKEKTKESSSKTQYKQTKEIKHE
EPKKQEQNKKQNEQKEEKEKRNFSQDIKNTRSTPIKKVQEQKKEEIKSSKNKMNVENSGT
EELSATESLTEPALSENEEKNKSSNQNKGRNVSSDNKQQQAKDVKMNQSQTRSNDNKKVD
PKQSSKKPQKKNETDDDDYGINDEEEDLPKNSKQKKLVQGSQKKNKMIVEDDDYEEKEED
KDDKELHKNSKSKRVLVKGGQKQNKMIDEDDYDAEEVDDYVEVKKTTSRTKALEEKNLKK
IEENKQKQQVSAKKDKAPPQKDKNSSNGNIDSDILAGQTIVFTGDFDGISRDTMSKIVTD
MGAKNTGSVSGKTTLLVHGSVLEDGRPPEQGKKYQTAKQKGTKIMNQSQFSDYLKDLTGK
SLEDYANVGQNGSRFDKFAAVPNNNNNNPQTQQKKDSQPSKKILQPLNKPKEATKYDPKS
KQQNQQPQMVIHKPPKQEQIWTEKYAPSSINLCIGNQKNYEKMMEWLHDWVEVVIKGNKK
QVKNSFFNRAQGVPDNSSNVNAKACLLSGPPGIGKTTSVRLIAKFMGYEIREWNASDERN
KKSVNNILGDLKSNSILNLLKKNNTSDQTNNKADDEVEAKTNKKFIILMDEVDGMSSGDR
GGNQALIDAIKNTNVPIFCICNDRMNPKIRSLANHCYDIKFIKPAKQDVAKYMKNVCEQE
GFKDVEIESLEAISERFGNDLRQTLNFLEMHFKTSKRLQGINSKQLNSGQKDATVMLDAF
QASTQLMQSFKFQKMTLRERIELFFIDYDLIPLLVHQNYLDTIKPREDASKNKKNDNFNV
KELQNLVDATSSIAQSDLLSKSIRQSGNWSLLPNFAFTSCIYPCDKVCEDKPIYPRFPEW
LGKFQTTKKTTRELREFRVSLSKSISGSRFAVKFDYVPFLLKIILSHLKKGKNSDIETVL
DYLEYYNIKPQHLKEHLNDLQYPKNDYYGVVSSDIKTKLTKEYNKRYSDSSNKIKTQKKQ
SKSEPSQGKYDKNLDDVVYSDTEELQLDENGDVVEPQQDEQEKSKIKKQQQKNKQNNKSK
APKTKKPKSKKSGSDSLTEEISEDEDGSNSLNQFIVDDTENDD
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaataactagtcaaatagtttattgaaatattttagtaaataagataccaaa
actgttaataattcgtaaaattcttctaaagacaaagacaaagaaaaagattctaaagaa
aaaacaaaagaatcttcatctaaaacttaatacaaataaactaaggaaataaagcatgaa
gaacctaaaaaataagaacaaaataagaagcaaaatgaataaaaggaagaaaaagaaaaa
agaaattttagttaagatataaaaaatactcgatcaactcccattaaaaaagtttaagag
tagaaaaaagaagaaataaaatcttctaaaaataaaatgaatgtagagaattcaggaact
gaagaattatctgccactgaaagtctaacagaacctgcattaagcgaaaatgaggaaaaa
aataaatcttccaatcaaaataaagggagaaatgtttcaagtgataataaatagtaataa
gcgaaagacgtaaaaatgaattaaagttagacaagatcaaatgataataaaaaagtagat
cccaagtaatcaagtaaaaagccataaaagaaaaatgagactgatgacgatgattacggt
attaatgatgaagaagaggacttacccaaaaatagcaaacaaaaaaaattagtataaggg
agccaaaaaaaaaataaaatgatagttgaagatgatgattatgaagaaaaagaagaggat
aaagatgataaggagttgcataagaatagtaaatcaaaaagggttttagtaaaaggagga
taaaaataaaataaaatgatagatgaagatgactatgatgctgaagaagtagatgattat
gtagaagtaaaaaaaactaccagcaggacaaaggctttagaagaaaagaatttaaaaaaa
atagaagaaaataaacaaaagtaataagtttctgcaaaaaaggataaagctcctccttaa
aaagataaaaatagttctaatggaaatatagattctgatattttagcaggataaacaatt
gtttttactggtgattttgatggaatttctagagatactatgtctaaaatagttacagat
atgggagctaaaaatacaggtagtgttagtggaaagaccacattgcttgtccatggaagt
gttttggaggatggaagacctcctgaataaggaaaaaaatactaaacagcaaaataaaag
ggaactaaaattatgaattagtcttaatttagtgattatttaaaggatttaacaggaaag
agtctagaagactatgcaaatgttggttaaaatggaagtagatttgataaatttgctgct
gtgcctaataataacaacaataatccttaaactcaatagaaaaaagactctcaaccttcc
aaaaaaatattataaccactaaacaaacccaaagaagctactaaatatgatcctaaaagt
aaataataaaattaataaccgtaaatggtcatccataagcctcctaaataagaataaatt
tggacagaaaagtatgctccaagcagtattaacctatgcattggaaactaaaagaattat
gaaaaaatgatggaatggttgcatgattgggttgaagttgtaataaagggtaataaaaaa
taagttaaaaattcatttttcaacagagcttagggggtacctgataattcaagtaatgtt
aatgcaaaagcctgcttattgagtggtcctccaggaataggaaaaacaacatcagtaaga
cttatagctaagtttatgggatatgaaataagagaatggaatgcttcggatgaacgtaat
aaaaagagtgttaacaatatactaggagaccttaaatctaactctattctaaatttatta
aaaaaaaataatacaagtgattaaacaaacaacaaggctgatgatgaagtcgaagctaaa
acaaataaaaaattcataatattaatggatgaagttgatggtatgtcttctggagacaga
ggtggtaaccaagctcttatagatgctatcaaaaatacaaatgtaccaatcttttgtata
tgtaatgataggatgaatcctaagattaggagcttagcaaatcactgttatgatatcaag
tttataaagccagcaaaataagatgttgcaaaatatatgaaaaatgtatgtgaataagaa
ggatttaaagatgttgaaatagaatcattagaagcaatatcagaaaggtttggaaatgac
ctccgttaaacattaaattttttggaaatgcattttaagacgagcaagagattataggga
attaattctaaacaactaaattcaggttaaaaggatgccacagtaatgctagatgcattt
taggcctcaacttagttgatgtagagtttcaaattctaaaaaatgactttgagagaaaga
atagaactattctttattgattatgatttgatcccactattagttcaccaaaattatctc
gatactatcaaacctagagaagatgcatctaaaaataaaaaaaatgataattttaatgta
aaagaactttaaaatctagtagatgcaacttcatctatagcgtaaagtgacttattaagt
aaatctattagataaagtggtaattggtcattacttccaaattttgcttttacaagttgt
atctacccatgtgataaagtttgtgaagataaacctatatatcctagattccctgaatgg
cttggtaagttttaaacaactaaaaaaacaacaagagaactaagagaattcagagtatct
ctctcaaaaagtatatctggctctagatttgctgtaaagtttgattatgtgccattttta
ctcaaaattatattgagccatctaaagaaaggaaaaaactcagatatagagacagtttta
gattacttagagtattataatataaaaccctaacacttaaaggaacatctcaatgattta
taatacccaaaaaatgattattatggtgttgtatctagtgatataaagacaaaattaaca
aaagaatacaataaaagatattccgatagcagtaacaaaataaaaacacaaaaaaagcaa
agcaaatcagaaccttcataaggtaagtatgataaaaatttagatgatgtcgtctattca
gatacagaagagttataattagatgaaaatggggatgttgttgaaccttagtaagatgaa
taagaaaagtcaaagataaaaaaacaataatagaaaaataaataaaataataaaagtaag
gcacctaaaactaaaaaacctaaatctaaaaagagcggtagcgattcactaacagaagaa
atcagcgaagatgaagatggttcaaacagtttaaattaattcatagttgatgacaccgaa
aacgatgattga
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integrated database retrieval system
