Tetrahymena thermophila: TTHERM_00954220
Help
Entry
TTHERM_00954220 CDS
T01020
Name
(RefSeq) DDB1- and CUL4-associated factor-like protein, putative
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
tet
Tetrahymena thermophila
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tet03009
]
TTHERM_00954220
04121 Ubiquitin system [BR:
tet04121
]
TTHERM_00954220
Ribosome biogenesis [BR:
tet03009
]
Eukaryotic type
90S particles
Other 90S particles
TTHERM_00954220
Ubiquitin system [BR:
tet04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
TTHERM_00954220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
Sof1
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_RFWD3
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
eIF2A
NBCH_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
KNTC1_N
Beta-prop_HPS5
Beta-prop_DCAF4
MIOS_WD40
Beta-prop_SPT8
PROPPIN
WD40_like
Beta-prop_NOL10_N
VPS8_N
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
7841909
NCBI-ProteinID:
XP_001018045
TGD:
TTHERM_00954220
UniProt:
Q23MP2
LinkDB
All DBs
AA seq
449 aa
AA seq
DB search
MVKINTICRSSNDYVRETKYDITKVQRNSNPTLHQFQKAREHQRALVATKLDKMFAKPFL
GCLTGHSDSISVITKCPNSLVKVISGTFDGELRAWDISERKTLFSLNAHKQSVKGVSFSR
DGQRFLSSGADNIINLYDFQDQLNNPDRDPLNVFYSKHVLGNVDHCWKGDNFVTSGGVVQ
VWNYERSKPVQSFEWGIDTVLKVKYNPSQFNLIAGTGIDRSVVLYDTRGDTAIQKIFLSN
KCQTICWNPTEPVNLIVGCDDGNCYSFDMRKMEQAKMIHKDHIGAVMDLDIAPTGRKFVT
GSYDKTIRIFDVEKGKSEEIYHTKRMHQIFSVCWSMDNQFILSGSDDMNIRIWKAKASQQ
LGVVDKRLQNSLNYREALKDKFKYNQDINKVQRKQHLPKYIQNAKRRKQEQKQAKHRKQQ
NMELNNVQQLSAPKPERTKKVEKVEITNN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagataaatacaatttgtagatcttcaaacgattacgttcgtgaaactaaatac
gatataactaaagtttaaagaaactcaaatcccactcttcattagttccaaaaagctcgt
gaacattaaagagctttagttgctactaaattagataaaatgtttgccaaaccctttttg
ggatgcttaactggacactctgattcaatttcagttattactaaatgcccaaatagttta
gttaaggttatttcaggtacttttgatggtgaattaagagcttgggacatttctgagcgt
aaaactcttttttctctaaatgctcataaataatctgttaaaggtgtttctttctctaga
gatggttaaagatttttatcaagtggtgctgataatattattaatctttatgatttctaa
gattaattgaataatccagatagagatcctttaaacgtattctatagcaagcatgtgtta
ggtaatgttgaccattgctggaaaggagataattttgtcacaagcggtggtgtagtttaa
gtttggaattatgaaagatctaaaccagtttagagtttcgaatggggtattgatactgta
cttaaggttaaatacaatccttcctaattcaacttaatcgctggtactggtattgataga
agtgtcgttctttatgataccagaggagatactgctattcaaaaaatatttctttctaat
aaatgctaaacaatttgctggaatcctactgaacctgttaacttaattgtaggttgtgat
gatggtaattgctacagctttgatatgcgtaaaatggaataagctaaaatgattcacaaa
gatcatattggtgctgtcatggatctagatattgcccctactggccgcaaatttgtaaca
ggaagttatgataaaacaattcgtattttcgatgttgaaaaaggcaaaagtgaagaaatt
tatcacacaaaaagaatgcattaaatattttcagtctgctggtctatggataactaattt
atattaagtggatctgatgatatgaatatcagaatctggaaagctaaagcaagccaataa
cttggtgttgttgataaaagactttaaaactccttgaattatagagaagcacttaaagat
aagtttaaatacaactaagatataaacaaagtatagcgtaaacaacatcttcctaaatat
atttagaatgccaaaagaagaaaataagaataaaaataagctaaacacagaaagtaataa
aatatggaattaaataatgttcagcaactctctgcacctaaaccagaacgtactaaaaaa
gtagaaaaagtagaaattacaaataattga
DBGET
integrated database retrieval system
