Tetrahymena thermophila: TTHERM_01034400
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Entry
TTHERM_01034400 CDS
T01020
Name
(RefSeq) type III restriction enzyme, res subunit family protein
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
tet
Tetrahymena thermophila
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tet03400
]
TTHERM_01034400
Enzymes [BR:
tet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TTHERM_01034400
DNA repair and recombination proteins [BR:
tet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
TTHERM_01034400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
PhoH
T2SSE
Motif
Other DBs
NCBI-GeneID:
7843033
NCBI-ProteinID:
XP_001012457
TGD:
TTHERM_01034400
UniProt:
Q235I9
LinkDB
All DBs
AA seq
2637 aa
AA seq
DB search
MSDKDLGEGKNKHFITTLVHYANKEKCRFTWKLREKTSGYENNDDNTVKRTKNQREDYIK
KYKDTSYEDEQTEMKLRRMDIIYRLYYTEDAKLRKLMMDYKTYVKKIGIDIQKLEEHSEL
QHNLRCVGYYQGIYKMYKEAQLRPDECNLVFMQLMKKDYEPKYKLENSEEPYNLLLSLFY
IIEDMQKQIMETPIFDEKDESKTKIIKEYKMIDEDSKPLEYVDSYNENTHENIIEFRYGY
DLFDEFRSDEIVQIRQKEKLNYVKEFYERYEDVLKNKSPDFWQFLLFDVLKALCNKSNTD
EQLQEILMNLLDDFDACRFLLSNRKEIILYLYKNHFAKDKQFSSSISSMKTDDSQGLTNY
EILKSIGMKDIDIERESRLGLKKKDLDQKVSQAQSKNQYDVDDEFSEIDFIKQEQSQLVQ
RIPSLEKSDYPEYIQLKISPMPRHHTHVTDLVKIEGNFPDWAREAFGSIQSLNVVQSKVY
KTAFQTDDNILICAPTGAGKTNIALMTVLREIEKHINPQTKQLIDPTFKIIYISPMKALA
SEIVDKFSGMLKHMNVKCKELTGDMQLTKKEIEETQIIVTTPEKWDVFTRKKNEVAETLR
LLIIDEIHLLNDERGPVLECLVSRTLQNIERQQKSVRMLGLSATLPNYLDVASFLHVKKE
SVFFFDATYRPVPLMQRYIGVREPKQSGFKVKRKKIDIYNDLSYSISKGILEHKKQVLIF
VHSRKETIVTAQYVLKKAQDCGELHLFKPVNSDKHSLPKIKDKELQKLAPWGLGFHHAGM
LRKDRNIVEKMFNDGQIRILVATATLAWGVNLPAYGVIIKGTDVYDPSRGGTQDLSVLDI
QQMFGRAGRPQFDNNGEATLMTDINKLNSFVAQLNNASFIESRFTAHLKEALNAEIALGN
IATLKEAFDWVNYTFYSIRLRRNPMGYGCKIAQNKELSIEMHITETIENALEHLDKLRLI
RWDRQNNYLASTELGRITSHYYINCDTMNTFCKGFGISLDNDEDIEENEQKRTEYKSDLG
ILKIISQAKEFENIKMRPEETEELAVVIKKYWIFEEQIDINIKKIGTNDSTSADNNTLLI
DTPEKILALISGYLTKYQYENFSLISDSQFVIQNSIRLLRCMLDIVTKKSMASNAELVQR
WCKYIESRLVPDESPLHQFCKSNWQGYNSFKQRKEFKDGFISEDVVYKIDDREISLDTIR
EMPATELAHAINWNTRIATVIKKFVCFIPRVEVEYSVRPIAQTVLKVDVLITPKWSWSNR
WHSKSELFNLVVDDENEILHHESFTISQQQVFTSTPTEISFFVPFRDSKVPYYRLLVQHD
TWVNQPETEVQINLEHIYFQGEKMEYTELLDLHPLPISALNNSDFEQIYKMKYFNPNQTQ
IFHAMYNTDHNILIGSPTGSGKTIMSELSALRVFNLYPEKKVIYVAPLKAIAKERLADWE
VRFGKIGKTVLELTGDYTPDLDALLKADVLITTPEKWDGISRNWHNRNYVQKTGLVIFDE
IHLLGQDRGPVLEVIVSRMNMISSKTGHKVRMVGLSTAMANGTDVADWFGVPKNYFFNFR
PHVRPVPLKIYFDGFSAKAYCPRMAEMNKPAFQQIRKFGEKKPVLVFVSSRRQTRLTALD
LIAHAMHDIGGGQSPFVMCQEDELQIYLENVKDEYLKQTLSFGIGMHHAGLDQDDRKIVE
ELFLNHKVQILVATSTLAWGVNLPARLVIIKGTEYFDPKTKRYVDMPVTDILQMIGRAGR
PQFDDKGIACVFVEQSKKNFYRKYLNDPFPIESSLISQIHDHFNAEIASGTITNKQQCMD
WITWTYFFRRMLKNPTYYNLENAETKQVKKFLIELVDECMNRLAEHGCITIDDELKFNVT
PTFLGQLAAFYYIKHESVFYFEKNLTANITIPELIRVLSYCKEFEEIPLRHNEENYNEAL
SKICPLKCDKSAFSSSNEKTFLLYQVHLFRLPPPIRDYITDAKIVVDSSVRILSAMIDLV
AEKRYLNTCINLCMIMQMIMQAVWFDQSPLINVPHFDQQIVKKLGLVHFCQLIEEYKKET
LRPTLKKIDKKFGDDKLWREVEEAIKSLPDISFRARIYPFDSEKLQKQDVNLKQSEIQLT
EGGEAVVQIIIDKENEKYPNKVIVQKTGKIKDASWWVLIGDEYTGKLHALKKIFFKKNLK
KDIQIILPESFETSKKLTVFLVSDSYLGLDQVFYLNLRSKDQKADEKYQAQSDESDSDIP
KPIRQRLSDDEDDKQKKKEKPSYPKFSKGNTLKKSKAKEEENSDEEEEEKDQQKESPEKK
QDTSDQKQEDKKKNILQKKKKEGDDENSKANDSRKDDDKDFDRSKGNNLYKKKDDTQKQN
EKKESDQSNNKQERKDQPAKGGDNKDFKKKRDNRERKPKYNNDRRQQDSEDEDEYDVGYK
TKEGSHIDEFTRKRREEKNMDKLDNQNNAQNEDDEDIVQKIKEDSDFSDEEEENQRSKYR
NKRGGGGGQNFSRGSGNQGGNKYTGNQLRKKNDDDYQPRQRENDDQKKRNFQGERKFNEN
QNQGEKREYEKKPYEKKQYEKKETQFVPKEKKEPVYEPKENPSSSSQSQQQQQKSEAPKQ
QTQTKPPPTGFKLRRKNSDELNAEDKKSSNNNNNNRNNNSNNNNNNNNNRGGNNSKR
NT seq
7914 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaagatttaggagaaggtaaaaataagcacttcattacaaccttagtccac
tatgcaaataaagaaaaatgcagatttacttggaagttaagggaaaaaacgtcaggttac
gaaaacaatgacgataatacagttaaaagaactaagaatcaaagagaagattacattaaa
aaatataaggatacttcatatgaggacgagtagactgagatgaaattaagaagaatggat
attatttatagattatactacactgaagacgcaaaattacgaaaattaatgatggattat
aagacttatgttaagaagataggaatagatatataaaagctggaagaacatagtgaatta
tagcataatttaagatgcgttggctattattagggtatttataagatgtataaggaagct
taacttagaccagatgaatgcaatcttgtctttatgtaattgatgaagaaagactatgag
ccaaaatataaattagaaaacagcgaagaaccttataatttattattgagtttgttttat
atcatagaagatatgcaaaagcagatcatggaaactccaatttttgatgaaaaggatgag
tctaagacaaaaattataaaagagtataagatgattgatgaagattctaagcctttagaa
tatgttgattcttataatgaaaatacgcatgaaaacattattgaattcagatatggttat
gatttgtttgatgaattcagaagtgatgaaatagtttaaatcagataaaaagaaaagctc
aattatgttaaggagttctatgaaagatatgaagatgttttgaaaaacaaatcacctgat
ttttggtagtttttattgtttgatgttttgaaggcgttgtgcaacaaaagtaatactgat
gaacaattgcaagaaattctcatgaatcttttggatgactttgatgcttgcagatttttg
ctttctaatagaaaagaaatcatcctttacttgtataaaaatcacttcgcaaaggataaa
caattctcatcctcaataagctctatgaaaactgatgactcgcaaggtttgaccaactat
gaaattttgaagtcaattggtatgaaagatatagatatcgaaagggagtctagattagga
ttaaagaaaaaagatttagattaaaaagtttcataggcttaaagcaaaaattaatatgat
gttgatgacgaattttctgaaatagattttatcaaataagaataaagttaattagtataa
agaattccctctcttgaaaaaagtgattatccagaatacatttaacttaaaatatctcca
atgccaagacatcacactcacgttactgatcttgttaaaatcgaaggaaatttccctgat
tgggcaagagaagcatttggttcaatttagtcattaaatgtagtacaatccaaagtttac
aaaactgccttttagacagatgataacattttaatttgcgcccctactggtgctggtaaa
acaaacatcgctttgatgactgttttaagagaaatagagaaacacatcaatcctcaaact
aaatagcttattgatcctacttttaaaattatttatatttcccctatgaaggcattagct
agtgaaatagtagacaaattttcaggaatgcttaaacatatgaatgttaaatgcaaagaa
ttaactggtgatatgcaactcactaaaaaggaaatagaagaaacataaattatagttact
acccctgaaaaatgggatgtcttcacacgtaagaaaaacgaagttgctgaaactcttcgt
ttgttaattattgatgaaatccacttacttaacgacgaaagaggtcctgttttagaatgt
ttggtttctcgtactctacaaaatattgaaagatagtaaaaatcagtcagaatgcttggt
ctttctgctactcttcctaactatttggatgtcgcttctttcctccacgttaaaaaggaa
tcagtctttttcttcgatgcaacatacagacccgttcctctcatgcaaagatatattggt
gttagagaaccaaaataatcaggctttaaagtgaaaagaaagaaaatcgatatttataat
gacttgtcttattctatttctaagggtattttagagcacaaaaagcaagttttgattttc
gtccattcaagaaaagaaaccatagttactgcttaatatgtattgaagaaagctcaagat
tgcggagaattgcatttgttcaagccagttaatagcgataagcattccttaccaaaaatt
aaagacaaggaactataaaagttagctccttggggtttaggtttccatcatgcaggtatg
ttgagaaaagatagaaatattgttgaaaaaatgtttaacgatggccaaattagaattctc
gtcgcaacagctactttagcttggggtgttaacttgcctgcttatggtgttatcattaaa
ggtactgatgtttacgatccaagcagaggtggaacttaggatttgtctgttctcgatatt
taataaatgtttggtagagctggtagaccttagttcgataacaatggtgaggcaactttg
atgactgatataaataaattgaactcctttgttgctcaattaaataatgcaagttttatt
gaaagtagatttacagcacacttaaaggaagcccttaatgctgaaatagctttgggaaat
atagccacattaaaagaagcatttgattgggttaactacactttttactctatcagattg
agaagaaatcctatgggttatggttgcaagatagctcaaaataaagaactctctatagaa
atgcatataacagaaaccatcgaaaatgcacttgaacatttagacaagttgagattgatc
agatgggacagataaaataattatttagcatctacagaattgggtagaattacctctcac
tattatattaattgcgatactatgaacactttttgcaaagggtttggtatttctctagat
aatgatgaagacattgaagaaaatgagtaaaagagaactgaatataaatccgatttaggc
atattaaagattatttctcaagctaaggaatttgaaaatatcaagatgagaccagaagaa
actgaagaacttgctgtagttatcaagaaatactggatttttgaagaataaattgatatc
aacattaagaaaataggcacaaacgatagcacttcagctgataataatactcttctcatt
gatacacctgaaaaaatcttagctcttatttcaggttatcttaccaaatatcaatacgag
aacttttcactcatatctgactcttaattcgtcattcaaaattcaatccgtctattgaga
tgtatgctcgatatagtcactaaaaaatctatggcttctaacgcagagcttgttcaaaga
tggtgtaaatacattgaatccagactagtcccagacgaaagtcctctccatcaattctgt
aaatcaaactggcaaggatataactcattcaagcaaagaaaagagttcaaggatggtttc
atctctgaagatgtcgtttataagattgatgacagagaaataagcttggatacaataaga
gaaatgccagctactgaattagctcatgctattaattggaatacaagaattgctactgtt
attaaaaagtttgtttgtttcattcctagagttgaggttgaatattctgttcgtcctatt
gcttaaacagtccttaaagtagatgttttaattacaccaaagtggtcttggtctaataga
tggcattctaaatctgaattgttcaatttagttgttgatgatgaaaatgaaattttacat
cacgaaagctttacaatcagctaacaataagtctttacttcaactcctactgaaataagt
ttcttcgttcctttcagagactccaaggttccctattacagattacttgtttagcatgac
acttgggtcaactaacctgaaactgaagtacaaattaatttagaacatatttatttccaa
ggtgagaagatggaatacactgaattgcttgatctccatcccttacctatttctgccctt
aacaactctgattttgagcaaatttacaaaatgaaatacttcaatcctaattaaactcaa
atattccatgcaatgtacaacactgaccacaacattcttattggttctcccacaggttct
ggtaaaaccattatgtccgaattatctgcccttagagttttcaacttatatcctgaaaag
aaggttatttatgtagcacccttgaaagctatagctaaagaaagattagcagattgggaa
gttcgttttggaaaaattggaaaaactgtgctagaattgactggtgattacactcctgat
ttagatgcattgctcaaggcagatgttttgattactacacctgaaaagtgggatggtatt
tcacgtaactggcacaatagaaactatgtctaaaagacaggtttggttatttttgatgaa
atccatttgcttggttaagacagaggacctgttttagaagttattgtttcccgtatgaat
atgatttcctcaaaaacaggacataaggttagaatggttggtctatctacagctatggct
aatggtacagatgttgctgattggtttggtgttcctaaaaattatttcttcaactttaga
cctcacgttcgtccagttcctcttaaaatctattttgatggttttagcgcaaaagcatat
tgtcctagaatggctgaaatgaataagcctgccttctaacaaatcagaaagtttggtgaa
aagaaacccgttcttgtttttgtttcatcaagaagacaaacaagattaactgctttagat
ttaatagctcatgccatgcatgatatcggtggcggatagagtcctttcgtaatgtgctaa
gaagacgagctttaaatctatttagaaaacgttaaagatgaatatcttaaataaaccctc
tcatttggtatcggtatgcatcatgcaggtttggatcaagatgatagaaaaattgttgaa
gaattgttcttgaaccacaaagtttaaattttagttgccacttcaactctagcttggggt
gttaaccttcctgctcgtttggtaatcattaaaggtactgagtattttgatcctaagaca
aagagatatgtagacatgcctgttactgatattttatagatgattggtcgtgctggtcgt
ccacaattcgatgataaaggtattgcttgtgtttttgttgagtaaagcaaaaagaatttc
tatagaaaatacttgaatgatcctttccctatcgaatcatctcttatcagccaaatccat
gaccactttaatgcagaaatagctagtggtactattactaacaaacaataatgcatggat
tggattacatggacatatttcttcagacgtatgcttaaaaatcctacttattacaattta
gaaaacgcagaaaccaagcaagttaaaaagttcttaattgagttggtcgatgaatgtatg
aacagactagctgaacatggttgcataaccattgatgacgaattaaaattcaatgttact
ccaactttcttaggttagcttgctgctttctactatattaagcacgaatcagttttctac
tttgaaaaaaatctaactgctaatattactatcccagaacttatcagagttctttcatac
tgcaaagaattcgaagaaattcctctccgtcacaacgaagaaaattacaatgaagctctc
tctaagatttgtcctcttaagtgtgataagagtgctttcagttcttcaaatgaaaaaact
ttccttctttattaagttcacttatttagattacctcctcctattagagattacattact
gatgcaaagatcgttgttgatagttctgttcgtattttgagtgccatgatcgacttagta
gctgaaaagagatacttgaatacatgcattaatttatgtatgatcatgcaaatgattatg
caagctgtttggtttgattagagtccattaatcaatgttcctcacttcgactagcagatt
gtgaagaaattgggattggtccacttctgtcaattaatagaagaatataaaaaggaaact
cttcgtcctactctaaagaagatagataagaaattcggtgatgataaactctggagagaa
gtcgaagaagctatcaaatcactaccagatatttcctttagggccagaatttatcctttc
gactctgaaaaattgcaaaagcaagatgttaacttgaaacaatctgaaatttaactcact
gaaggaggtgaagcagtggtttaaattattattgataaggagaatgaaaaatatcccaat
aaggtgattgtttagaagacaggaaaaattaaagatgcatcttggtgggttttaattggt
gatgaatacacaggcaagcttcatgctttgaagaaaatattcttcaaaaagaatttaaag
aaggatattcaaattattttacctgagagcttcgaaactagcaaaaagctgactgttttc
ttggtttctgattcatatcttggattagattaagttttctatttaaatttaagaagcaaa
gactaaaaagctgatgaaaaatattaagcctaaagcgatgaatcagatagtgacattcca
aagccaattagatagagacttagtgatgatgaagatgacaaacaaaagaagaaagaaaag
ccttcttatcctaaattctctaaaggcaacacattaaagaagagcaaggcaaaagaagaa
gaaaatagcgatgaagaagaagaagaaaaagattaataaaaagaaagtcctgaaaagaaa
caagatactagtgactaaaagcaagaagataaaaagaaaaatattctttagaaaaagaaa
aaagaaggagatgatgaaaatagtaaagctaacgatagcaggaaagatgatgataaagac
tttgatagaagcaaaggaaataacctatataaaaagaaagatgacacttaaaagtaaaac
gaaaagaaagagtctgactaaagtaacaataaataagagagaaaggatcaacctgctaaa
ggaggagataataaagattttaaaaagaaaagggataacagagaacgtaagcctaaatac
aacaatgatagaagacaataagattctgaagatgaagatgaatatgatgtaggctataag
actaaagagggctctcacatcgatgaattcactcgtaaaagaagagaagaaaagaatatg
gataaacttgataactaaaataatgctcagaatgaagatgacgaagatatagtttaaaaa
ataaaagaagatagtgactttagtgatgaagaagaagaaaaccaaagatcaaaatacaga
aataaaagaggtggcggtggtggataaaactttagtcgcggtagtggtaactaaggtggt
aataaatacactggaaattaattaagaaagaaaaatgatgacgattactaacccagacaa
agagaaaatgatgattaaaaaaagagaaatttctaaggcgagagaaagttcaatgaaaat
taaaattaaggagaaaagcgtgaatatgagaagaagccctacgaaaagaagcaatatgaa
aagaaagaaactcaattcgtgccaaaagaaaagaaagaacctgtttatgaacccaaagaa
aatccatcctcttcttcttaatcctaacaatagtaataaaaatcagaggctccaaaacaa
caaactcaaactaagccaccaccaactggttttaaactaagacgtaaaaatagcgacgaa
ttaaatgcagaagataaaaagagttcaaacaataacaataataatagaaataataatagt
aataataacaacaacaataataataacagaggtggcaataactctaagcgttga
DBGET
integrated database retrieval system
