KEGG   Tetrahymena thermophila: TTHERM_01039830
Entry
TTHERM_01039830   CDS       T01020                                 
Name
(RefSeq) NOT2/NOT3/NOT5 family protein
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
tet  Tetrahymena thermophila
Pathway
tet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TTHERM_01039830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tet03019]
    TTHERM_01039830
Messenger RNA biogenesis [BR:tet03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TTHERM_01039830
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     TTHERM_01039830
SSDB
Motif
Pfam: NOT2_3_5_C MDH1B_N
Other DBs
NCBI-GeneID: 7837617
NCBI-ProteinID: XP_001025986
TGD: TTHERM_01039830
UniProt: Q24DA4
LinkDB
AA seq 243 aa
MNQGGYPAMYQPIQAQYIQQPQPQHQILIQQQLQQSQQVPILNQGIPGYQQTQILNPQFN
DDSKKKKTLVGKMEELKNVPNEKQMYVFGMDIPQTGITNLNQEGLIHQTFGSPFAENPSV
KTDALNFQIPQSYQKPQVQLNPTLIKKLPEDTLFYIFYNYPDETQQFAAVQVLYEKGWKY
NHNMLTWIKEIEEVGKNLYKFSFFNFKEWKTLKADNIEMNLQEDLVTLADFEKSMTVDQN
KQI
NT seq 732 nt   +upstreamnt  +downstreamnt
atgaattaaggaggatatccagcaatgtattaaccaatttaggcacaatatatctagcaa
ccttagccatagcattaaattcttatataatagcaactttagcaatcacaacaagttcct
atcttaaatcaaggcattcctggctatcaatagacctaaatactaaatccttagtttaac
gatgattctaaaaagaagaagactttggtaggaaaaatggaggaattaaaaaatgttccc
aatgaaaagtaaatgtatgtctttggtatggatattccttaaacaggaatcacaaacttg
aattaggaaggactgattcactaaacttttggatctccttttgcagaaaatccttctgta
aaaacagatgctcttaatttttagattccttaatcttattaaaagccccaagttcaattg
aatccaactttgataaaaaaattgcctgaagatactcttttttacatcttttacaactat
cctgatgaaacgcaatagttcgctgcagtctaagttttatacgaaaaagggtggaaatat
aatcacaatatgctaacttggattaaagaaatagaagaagtaggcaaaaatttatataaa
ttttctttctttaacttcaaggaatggaaaacccttaaagctgataatatagaaatgaat
ttataagaagatttggtaaccttagcagattttgagaaatcaatgacagtcgattaaaat
aagcaaatttga

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