Tetrahymena thermophila: TTHERM_01106220
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Entry
TTHERM_01106220 CDS
T01020
Name
(RefSeq) mRNA export factor, putative
KO
K14298
mRNA export factor
Organism
tet
Tetrahymena thermophila
Pathway
tet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TTHERM_01106220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_01106220
03036 Chromosome and associated proteins [BR:
tet03036
]
TTHERM_01106220
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TTHERM_01106220
Chromosome and associated proteins [BR:
tet03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TTHERM_01106220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_RFWD3
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_HPS5
TFIIIC_delta
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
7846402
NCBI-ProteinID:
XP_001030283
TGD:
TTHERM_01106220
UniProt:
Q22BD5
LinkDB
All DBs
AA seq
383 aa
AA seq
DB search
MMQRFQGFQLSDNDSQKETITLSSNNQHQQPKDTISCIKWIPLPNNHMFVCSTWGGELIF
YQCVFQQYPVLQMVNYFEYTHPIVTCQWKSDASCVFFAGGDGSLMCYQINNNKYSNQQVF
QIDQYQLPAIGIFYVNQYDILLVVNCEGEIVLYNAQNFQNPPIKTKLDFPAICCDFNYPL
VMIGLMEQKMVLFNLDSLLKNNQYKFEYKESQLGKGSPLQCVAISPDMNVIGLSSLDGRG
NISKLKKIEQYNMLPTYTSDNVITFKGHKEDRTQQSSYYRTPQKYQDLYPINQIAFNIKN
KHFLATLGADGKIIYWDYDRKNKIVEYQFSGRAISTGAITFDGEFLAFGLGYDWNQGMQG
IGGYPPSIHVLRITDKELYYRGN
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaagattttaagggttttaactcagcgataacgattcttaaaaagaaactatt
actttatcatcaaataattaacattaatagcctaaagacacaatatcatgtataaaatgg
attcctttaccaaacaaccacatgtttgtttgctcaacatggggtggtgaattaatattc
tattaatgtgtattttagcaataccctgtcctttaaatggtcaattactttgaatatacc
caccctattgtgacatgctaatggaaaagtgatgcatcatgtgttttttttgcaggagga
gacggttctttaatgtgttactaaataaataacaacaaatatagcaatcaataagtcttt
tagatagattaatattagcttcctgctattggtatattttatgttaatcaatatgatata
ctactagtagtcaattgtgaaggagaaatagtactttataatgcttaaaatttttagaat
cctcctataaaaacaaaactagattttccagcaatatgttgtgatttcaattacccttta
gttatgattggcttaatggaataaaaaatggttttgtttaacttagattccttgcttaag
aataatcaatacaaatttgagtataaagaatcttagttaggaaagggatctcctctatag
tgtgttgcaatatctccagacatgaatgtaattggactttcttctttagatggaagaggg
aatatatctaaacttaaaaagatagaatagtacaacatgcttccaacttatacttctgat
aacgtaataacattcaaagggcacaaagaagatcgtactcagtaatcaagctattataga
actcctcaaaaatatcaggatctctatcctattaatcaaattgcctttaacataaaaaat
aaacactttctagcaaccttaggagctgatggaaaaattatatattgggattatgataga
aaaaataaaattgttgaataccaattttctggcagagctataagcactggagcaattaca
tttgacggagaatttttggcatttgggttaggatatgattggaattaaggaatgtaaggt
ataggaggatatcctccttcaattcatgttttaagaattactgataaagaactttattat
agaggaaattga
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