Tetrahymena thermophila: TTHERM_01126410
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Entry
TTHERM_01126410 CDS
T01020
Name
(RefSeq) endonuclease/exonuclease/phosphatase family protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
tet
Tetrahymena thermophila
Pathway
tet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TTHERM_01126410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tet03019
]
TTHERM_01126410
Enzymes [BR:
tet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
TTHERM_01126410
Messenger RNA biogenesis [BR:
tet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TTHERM_01126410
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TTHERM_01126410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
7835500
NCBI-ProteinID:
XP_001026022
TGD:
TTHERM_01126410
UniProt:
Q24DC8
LinkDB
All DBs
AA seq
380 aa
AA seq
DB search
MQTLFQIVGKIKSLLGFNRGRKGIQKMDNINKNNQQLSNQISITSYNILADLYTDPWYFP
YCPKQYLNFDYRKWKIVEEIKLINSDIVCLQEADHIEDFYYQQFQDLGYQIQYALKPYRA
EGILVMFKKDKFKMISEHVINFDNEIPDTFNKANYQRNNNALIIQLKHLISDLNIVIANT
HLFWNPQNEEVKLLQTAQILQHLTKNYKQDENIILCGDFNSMPTSNVIKYITDKKEPHLS
RVEKQFAKYVLIKDMMAIHNMFSEMNLIDLKSSYDDYLKTGKHPEFTNYTQNFKGTLDYI
LFNPNMKQFQLSEVREIPIDLIKKQKGLPSQDYPSDHLPITAIFSINQDGQDQKQNSEYI
NDQNQDDNNNNLPPTQEKQV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactttattttagatagtaggtaaaataaaaagcttattaggatttaacagagga
cggaagggtatctaaaagatggataatataaataagaataatcagcagctttctaattaa
atttcaataacttcatacaatatattagcagatttatacactgatccctggtatttccct
tattgcccgaagcagtatttaaattttgattacagaaaatggaagatagttgaagaaata
aagcttattaacagcgatattgtatgccttcaagaagcagaccacatagaagatttctat
tattagcaattttaagatttaggctatcaaatttaatacgcattaaagccttatagagct
gaaggaattttggtaatgtttaagaaagataaatttaagatgatttctgagcatgttatc
aactttgacaatgagattcctgatacttttaataaggcaaattactaaagaaacaataat
gctctgataatttaattaaagcatttaatttctgatttaaatatagttatagctaatacg
catctcttttggaatccatagaatgaggaagttaaactactccaaactgcttaaatattg
cagcatcttacaaagaattataaataagatgaaaatataattttatgtggagattttaat
tctatgcctaccagtaacgttataaaatacataacagataaaaaagaaccccacttaagc
agagttgaaaagcaatttgcaaaatacgtgcttatcaaagacatgatggctattcataat
atgttcagtgaaatgaatttaattgatttgaagagctcttatgatgattatttaaaaact
ggtaaacaccctgaattcactaattatacataaaatttcaaaggaactcttgattatatt
ttatttaacccaaatatgaagtaattctaattatctgaagtcagagaaatacctatagat
ttgattaaaaaataaaagggattacctagctaagattatccttcagatcatttgccaatt
acagctatttttagtataaactaagatggttaagattagaaataaaattcagaatatata
aatgaccaaaattaagatgataataataataatttacctccaacctaagaaaagtaagta
tga
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