Tetrahymena thermophila: TTHERM_01262890
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Entry
TTHERM_01262890 CDS
T01020
Name
(RefSeq) DNA topoisomerase I
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tet
Tetrahymena thermophila
Pathway
tet03440
Homologous recombination
tet03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TTHERM_01262890
03460 Fanconi anemia pathway
TTHERM_01262890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tet03032
]
TTHERM_01262890
03400 DNA repair and recombination proteins [BR:
tet03400
]
TTHERM_01262890
Enzymes [BR:
tet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TTHERM_01262890
DNA replication proteins [BR:
tet03032
]
Eukaryotic type
DNA Topoisomerases
TTHERM_01262890
DNA repair and recombination proteins [BR:
tet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
TTHERM_01262890
FA (Fanconi anemia) pathway
TTHERM_01262890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-GeneID:
7835491
NCBI-ProteinID:
XP_001026048
TGD:
TTHERM_01262890
UniProt:
Q24DD8
LinkDB
All DBs
AA seq
1378 aa
AA seq
DB search
MSRQERDFPSLGSQIDESQQRQKKQQKQINYESNNKVTVNGMNDLLGFYYEGDNQQSQSS
NYNNNQKNKQSQRNQDKQSNKQQYEKKENRNNQAAYERKDQNNQYEAKNSQQNYNSQYEA
VQKSYQSKDDQQNNRYEQNSNTFTDKQQDSRNDNENRGNRNRGNRQNYNNSQKDQNENKQ
QQFQRMLKNDVDEYDDNDDEDQKRGNKYNTKGNQQKQQGDRYQQNYQQYEVKKVQEVYQQ
KNQYQEQNTKQNSNNNQQQNQNNNQVFVEKVIDNSNQSKVNQNNKNNQQKGKEEYVAKKT
LQYQEQKVEYVQKQPNNTSSNNTKDIYVPKSSQDQQNQQTVYVPKSVVQQTQQEQVQKNE
QQGKKNQKQNQVMYEEYIPAQQQNQAQQSSKSNQQQEQYQQNKQRNEYQKQEYVPKNQNN
NNQQFVEKYEQKSAKTKYVTKDESQQQESYQRADNQQAQQQKQNDEESKQQDQRQGKLKG
KTARQKEQEKQEVSNEWGTDPKKYINENQTFYLKEDAYYHYTQNKYNGQRRGGLQKVVMI
AEKPSIAKSIADALSNNSSKSVKGYSKYLPVHEFEGQFKGNRVLFKVTSVAGHVYSLDFQ
KEYDQWNKVNPINLFSAKTIKVEANPSQGVVKHLEKEAQDASYLILWLDNDREGENICFE
VKSICEAFMCKEQNTQQILRAKFSSLTKSDLVQAFKNVRDPPNMNESKAVDARQIIDLKI
GAAFTRYQTLFFRNRYPELNENIISFGPCQTPTLGFCVEREDEIKNFKPRLYFRIRATFV
TEDGMEVVSYCDKGHIYDQGESNKIFKDVLNQQHIQITQVSSDFGTKQRPEGLNTVQLLK
IASSYLHMSPMETMHVAERLYLNGYITYPRTESTAYPKAFQFREILNSLQSDSDYGKFAS
NLLQDYKQPRSGVDMGDHPPITPTTNYPNSLGGDERKLYDYISKHFIASLSEDCKYKKIT
IQGSICNYNFIARGIQMVNKGFTEVQDHISLGENTIASNLQQGKQLKVTSINQEQEYTSA
PGYITESELISLMEKNSIGTDASMATHIQNIVNRNYVQINGSNRSLVPTELGRSLVHGYQ
KIDPELVQPQIRSKIENMVDQIAKGNKQFADVINDSMRIFQAKYLTFVENILKIDSLFGQ
FCTTIEDTLESAKPFSKCGVCNRFMKIIEKAGKIICEKCDVSLFIPSNGKYRLAGEKKCP
YDKYQVIFFTSLHTPNVSFEVCPKCYTESPNMESDQVTCSICTNEECKLSMNSRFLKECQ
ICKMGDIVIEPQVAQKLAAMCNECWTQWSLPIQNKDLKVNKEKKCDKCQSQLISFKHIIK
EDQPSDKEKEKQVKIIKFSKTDFVDVCLFCDAELKKECHTVEYCEPRKRRQQRRKKRQ
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgagtagataagagagagattttccttcgttgggttcatagatagatgaatctcaacaa
aggtaaaaaaagtaataaaaataaatcaactatgaaagcaacaataaagttacagtaaat
gggatgaacgatctattaggattttactatgaaggagataattagtaaagctaatcttca
aattataataataattagaagaataagtaatcccaaagaaatcaagataaataaagtaat
aaatagcaatatgaaaagaaagaaaatagaaacaactaggctgcttatgaaagaaaagat
caaaataattaatatgaggctaaaaactcatagcaaaattataattcataatatgaagct
gtctaaaaaagctattaaagtaaagatgatcaataaaataatagatatgaacaaaactct
aacactttcacagataagtagtaagatagcagaaacgacaatgaaaatagaggtaataga
aatagaggtaatagacaaaactacaacaattcttaaaaagattagaatgaaaataagcaa
taataattttagagaatgcttaagaatgatgtggatgaatatgacgataatgatgatgaa
gattaaaaaagaggaaataagtataatactaaaggaaatcaacaaaaataataaggtgac
agatatcaacaaaattatcaataatatgaggtcaaaaaggtttaggaagtctattaacaa
aaaaattaatatcaggagcaaaatactaagcaaaatagcaataataattagcaatagaat
taaaataataattaagtttttgttgaaaaagttattgataactctaactaatctaaagtt
aaccaaaacaataaaaacaactaataaaaagggaaggaagaatatgttgctaagaaaact
ttacaatattaagaatagaaggtagagtatgtttaaaaatagcctaataatacttcaagt
aataatacaaaagatatctatgtaccaaaatctagctaagattaacagaactaataaact
gtttacgtacctaagagcgtagtataacagacttaacaagaataagtatagaaaaatgag
caataaggtaaaaagaattaaaaataaaattaagttatgtatgaagaatatatacctgct
taatagtaaaactaagcttaacaaagtagcaaaagtaattaataataagaatagtattaa
caaaacaaatagaggaatgaatatcaaaaacaagagtatgttcctaaaaattaaaataat
aataatcaataatttgttgaaaaatatgaataaaaatcagctaaaactaagtatgttaca
aaggatgaaagccaatagtaagaaagctattaaagggcagataactaataagcataatag
tagaaataaaatgatgaagagagcaaatagcaagattaaagacaaggtaaattgaaagga
aagactgctagataaaaggaataagaaaaataagaagtttcaaatgaatggggcactgat
cctaaaaaatatattaatgaaaattagacattttatttaaaagaagatgcttactatcac
tacacttagaataaatataatggttaaagaagaggaggtctttaaaaagtagttatgatt
gctgaaaaaccctctatagccaaatccattgcagacgctctttctaacaactcttcaaag
tctgtaaagggatacagcaaatacttacctgtgcacgaatttgaaggatagttcaaagga
aacagagttttgttcaaggttacaagtgttgcaggtcatgtttactctttagatttctag
aaagaatatgatcagtggaataaagtcaatcctataaatctattttctgctaaaactatt
aaagttgaggctaatcctagttaaggcgttgttaaacatttagaaaaagaagcataagat
gcatcttatttaattttatggctagataacgatagggaaggtgaaaacatctgctttgaa
gttaaatctatatgtgaagcatttatgtgtaaagaataaaatacacaataaattttaaga
gccaagttttcttctttgacaaaatcagatttagtttaagcttttaaaaatgtaagagat
cccccaaatatgaacgagtctaaggctgttgatgctcgttaaataatagatcttaaaata
ggtgctgcatttacaaggtatcagacactatttttccgtaacagatatcccgaattaaat
gaaaatattatatcttttggtccttgctaaacaccaacattgggattctgtgttgagaga
gaggatgagattaaaaatttcaagccccgtttatacttcagaattagagctacttttgtc
acagaagatgggatggaagtagtttcatattgtgataaaggtcatatttatgattaagga
gaatcaaacaaaattttcaaagatgtacttaattagtaacatatccaaattacttaagtt
agttctgattttggtactaaataaagacctgaaggattaaatacagtctagttactaaaa
atagcttcaagttatttgcacatgagtcctatggagaccatgcatgtagctgaaaggctt
tatcttaacgggtatattacctatcctcgtactgaatcaacagcatatcctaaagcattc
taatttagagaaatattgaattccttacaatcagattctgattatggaaaatttgcttct
aatttattgcaagattataaataaccaagatcaggagtagatatgggtgatcatcctccc
attactccaactacaaattatcctaattctcttggtggtgatgaaagaaaattatatgac
tacatatctaagcattttattgctagtttaagtgaagattgcaaatataagaaaattact
atttaaggaagtatctgtaattacaacttcatcgcaagaggaatataaatggttaataaa
ggtttcaccgaggtttaagatcatattagtttaggtgaaaatactatagcttctaattta
taacaaggtaagtaacttaaagtaaccagtattaactaagaataagagtatactagtgct
ccaggctacatcacagaatcagagcttatatcattgatggaaaaaaatagtattggtaca
gatgcctccatggctactcatatataaaatatagtaaatcgtaactatgtttaaataaat
ggttcaaatagaagtttggttcctactgaattaggaagatctcttgtccatggatattaa
aaaatagatcctgagcttgtataaccctagataagatctaaaattgaaaatatggttgat
taaattgctaaaggaaataagcaatttgctgatgttataaatgattctatgagaatattt
taagctaagtaccttacatttgtagaaaatatattgaagattgacagtttgtttggataa
ttttgcactactattgaagacacactggaatcagcaaaaccgtttagcaaatgtggagtt
tgtaatagatttatgaaaattattgaaaaggcaggcaaaattatatgtgaaaaatgcgat
gtttcattatttattccatcaaatggtaaatacagattagctggtgaaaaaaaatgtcct
tatgataaatattaagtaatctttttcacatccttgcatactcctaatgtttcatttgaa
gtttgtcctaaatgctatacagagtctcctaacatggaaagcgactaagtaacatgttct
atttgcactaatgaggaatgtaagctttcaatgaattccaggtttttgaaagaatgctaa
atttgtaaaatgggtgatatcgtcatcgaaccataagtagcacaaaaattagctgctatg
tgtaacgaatgctggacttaatggagtcttcccatttaaaataaagatctcaaagttaat
aaggaaaagaaatgcgataaatgctaaagctagcttatttctttcaaacatattattaaa
gaagattaaccttctgataaagaaaaagagaagcaagttaagattattaaattttctaaa
acagattttgtagatgtttgcttattctgtgatgctgaactcaaaaaagagtgccataca
gttgaatattgcgagcctagaaagagaagataacaaagaagaaaaaaaagacaatga
DBGET
integrated database retrieval system
