KEGG   Thermococcus eurythermalis: TEU_04815
Entry
TEU_04815         CDS       T03421                                 
Name
(GenBank) RNA-binding protein
  KO
K03679  exosome complex component RRP4
Organism
teu  Thermococcus eurythermalis
Pathway
teu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:teu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TEU_04815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:teu03019]
    TEU_04815
Messenger RNA biogenesis [BR:teu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     TEU_04815
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     TEU_04815
SSDB
Motif
Pfam: ECR1_N_2 KH_6 RRP4_S1 KH_1 ECR1_N KH_2 RRP40_S1 KH_KhpA-B KH_KRR1_2nd
Other DBs
NCBI-ProteinID: AIU69709
UniProt: A0A097QTB7
LinkDB
Position
complement(894252..895025)
AA seq 257 aa
MRRIFVKPRELVVPGTLLAQGPFKNGRGTFREGNRIYSTVIGLVEIRGDLIRVIPLEGPY
IPEVGDNVLGKIVDVKFSNWTVDIGAPYQANLRVQDAVEERIDLLKTDLRKIYDIGDIIY
AKVKAFNEINQIDLTTKGMPFKGGPLRGGQLVTITPSKVPRLIGKGGSMINMIKTLTGTR
IIVGQNGWVWVSGKNDELEKLAIEAILKVDRESHTQGLTDRVKEYLLSRLRELKEQGVIA
EIPQLGEKEGENDDGQA
NT seq 774 nt   +upstreamnt  +downstreamnt
atgaggcggatttttgtaaaaccaagggaactcgtcgtccctgggaccctgctcgcccag
gggccgtttaagaacggaagaggaacctttagagaaggcaacaggatttactcgacagtg
ataggccttgtggagataaggggcgacctcataagggtcataccgcttgaagggccctac
atccccgaggttggagacaacgtcctcggaaagatagtggacgtcaagttctcgaactgg
acagtggacatcggcgcaccgtaccaggcaaacctccgcgtccaggacgcagtcgaggag
cgcatagacctgctcaagacggacctgaggaagatatacgacataggagacataatctac
gccaaggtcaaggcgttcaacgagataaaccagattgacctgacgacgaaagggatgccc
ttcaagggaggcccgctcagaggcggacagctcgtcacgataacgccctcaaaggtgccg
aggctcatcggtaagggcggctcaatgatcaacatgattaagacgctgacgggaacgagg
attatagtcggccagaacggatgggtctgggtgagcggaaagaacgacgagcttgagaag
ctcgcgatagaggccatcctcaaggtggaccgcgagagccacacccagggcctaaccgac
agggtcaaggagtatctgctctcaaggctcagggagctaaaggagcagggagttattgcc
gaaatcccccagcttggggagaaggaaggtgagaatgatgatgggcaggcctga

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