Thermococcus eurythermalis: TEU_04815
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Entry
TEU_04815 CDS
T03421
Name
(GenBank) RNA-binding protein
KO
K03679
exosome complex component RRP4
Organism
teu
Thermococcus eurythermalis
Pathway
teu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
teu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TEU_04815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
teu03019
]
TEU_04815
Messenger RNA biogenesis [BR:
teu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TEU_04815
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
TEU_04815
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ECR1_N_2
KH_6
RRP4_S1
KH_1
ECR1_N
KH_2
RRP40_S1
KH_KhpA-B
KH_KRR1_2nd
Motif
Other DBs
NCBI-ProteinID:
AIU69709
UniProt:
A0A097QTB7
LinkDB
All DBs
Position
complement(894252..895025)
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AA seq
257 aa
AA seq
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MRRIFVKPRELVVPGTLLAQGPFKNGRGTFREGNRIYSTVIGLVEIRGDLIRVIPLEGPY
IPEVGDNVLGKIVDVKFSNWTVDIGAPYQANLRVQDAVEERIDLLKTDLRKIYDIGDIIY
AKVKAFNEINQIDLTTKGMPFKGGPLRGGQLVTITPSKVPRLIGKGGSMINMIKTLTGTR
IIVGQNGWVWVSGKNDELEKLAIEAILKVDRESHTQGLTDRVKEYLLSRLRELKEQGVIA
EIPQLGEKEGENDDGQA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggatttttgtaaaaccaagggaactcgtcgtccctgggaccctgctcgcccag
gggccgtttaagaacggaagaggaacctttagagaaggcaacaggatttactcgacagtg
ataggccttgtggagataaggggcgacctcataagggtcataccgcttgaagggccctac
atccccgaggttggagacaacgtcctcggaaagatagtggacgtcaagttctcgaactgg
acagtggacatcggcgcaccgtaccaggcaaacctccgcgtccaggacgcagtcgaggag
cgcatagacctgctcaagacggacctgaggaagatatacgacataggagacataatctac
gccaaggtcaaggcgttcaacgagataaaccagattgacctgacgacgaaagggatgccc
ttcaagggaggcccgctcagaggcggacagctcgtcacgataacgccctcaaaggtgccg
aggctcatcggtaagggcggctcaatgatcaacatgattaagacgctgacgggaacgagg
attatagtcggccagaacggatgggtctgggtgagcggaaagaacgacgagcttgagaag
ctcgcgatagaggccatcctcaaggtggaccgcgagagccacacccagggcctaaccgac
agggtcaaggagtatctgctctcaaggctcagggagctaaaggagcagggagttattgcc
gaaatcccccagcttggggagaaggaaggtgagaatgatgatgggcaggcctga
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