Thermococcus eurythermalis: TEU_07375
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Entry
TEU_07375 CDS
T03421
Name
(GenBank) RNA-binding protein
KO
K07573
exosome complex component CSL4
Organism
teu
Thermococcus eurythermalis
Pathway
teu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
teu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TEU_07375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
teu03019
]
TEU_07375
Messenger RNA biogenesis [BR:
teu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TEU_07375
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
TEU_07375
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ECR1_N
S1
EXOSC1
Auto_anti-p27
OB_RRP5_4th
A2L_zn_ribbon
DZR_2
S1_RRP4
HVO_2753_ZBP
Zn_ribbon_NOB1
Zn_ribbon_PaaD
DZR
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AIU70166
UniProt:
A0A097QUL1
LinkDB
All DBs
Position
complement(1338611..1339204)
Genome browser
AA seq
197 aa
AA seq
DB search
MEDRKVKNGDLVLPGDYLGVIEEFMPGEGVREENGELYATRAGRVRINPEKMEISVEPVT
DTPPLPQVGDIVLARVIEVKPQAVIVQLLQIEGRENDREIATSKLAGIHISQVKDGFVED
ITKEFKIGDVVRAKVIANEKSPIQLTTRGKDLGVVYALCSKCRTPLIRRGDKLICPRCGN
VETRKLSPYYRKMKVSL
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggaggataggaaggtcaaaaacggcgacttggtgcttcctggagattacctcggtgtc
atagaggagttcatgcccggcgagggtgttagagaagagaacggcgagctctacgccacg
agggctggcagagtcaggattaacccggagaaaatggagataagcgtcgagccagtaacc
gacacgccaccacttccacaggtcggggacatagtcctcgcgagggtcatagaggtcaag
ccacaggcagtaatcgtccagctcctccagatagagggcagagaaaacgacagggagata
gcgacttcaaaactggccggaatccatatctcgcaggttaaagatggcttcgtcgaggac
ataaccaaggagttcaagattggcgacgtcgtgagggcaaaggtcatagccaacgagaag
agcccgatacagctcaccacgcgcggaaaggacctcggcgtcgtttacgccctctgctcc
aagtgcaggactccattgataaggcgcggagacaagctcatctgcccgcgctgtggaaac
gtcgagacgaggaagctctccccttactatagaaagatgaaggtgtcgctatga
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