Thermoanaerobacter sp. X514: Teth514_0089
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Entry
Teth514_0089 CDS
T00648
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tex
Thermoanaerobacter sp. X514
Pathway
tex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Teth514_0089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tex03021
]
Teth514_0089
03019 Messenger RNA biogenesis [BR:
tex03019
]
Teth514_0089
Transcription machinery [BR:
tex03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Teth514_0089
Messenger RNA biogenesis [BR:
tex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Teth514_0089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
ATPase_2
OB_RNB
NACHT
AAA_25
AAA_14
Spore_III_AA
AAA
AAA_24
ABC_tran
DUF5855
DUF7440
SAP
Motif
Other DBs
NCBI-ProteinID:
ABY91411
LinkDB
All DBs
Position
88046..89572
Genome browser
AA seq
508 aa
AA seq
DB search
MHFDINTLGNLSLMELREIAKELGIKSITKYRKQELREKILEKVSQLNGENLIQEDNRKE
EGLNEGPTQELQESRVGKNTDDTSNTNSNISKNGYAKSISTENSANGLQAQSKPSKDILP
IAKELSDPLKELIQTQGDVVAEGILDILPDGYGFLRVENFVQGPKDIYISQSQIRRFGLK
VGDKVRGITRIPREGEKYSAILYVESINGEDPENAKKRIPFDELTPIFPNEKLRLETSPT
EFSMRLVDIIAPIGKGQRGMIVAPPKAGKTTLLKQIANSISQNHPEVILIVLLIDERPEE
VTDMKRSIKGEVVYSTFDELPEHHTKVAEMVLEHAKRLVEYKKDVVILLDSITRLARAYN
LITPPSGRTLSGGIDPSALHPPKRFFGAARNIEEGGSLTILATALIETGSRMDEVIFEEF
KGTGNMELHLDRKLQERRIFPAIDIYKSGTRKEELLLTKEELEAMWILRKAMSNLPPAEV
TEMLIEKLIRTKSNAEFINMIRAQLYKS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
ttgcattttgatattaatactttgggaaatttgagtttgatggaactgagagaaattgca
aaagagttaggcattaaaagtattacgaaatacagaaaacaagagctgagagaaaaaatt
ttggaaaaagttagtcaattaaatggagaaaatttaattcaagaggataacagaaaagag
gaaggtttaaatgaggggccaacacaagaattacaagaaagtagggtagggaaaaataca
gacgatacttcaaatacaaattctaacatatcgaaaaatggatatgcaaagtctattagt
actgaaaatagcgcaaatggattacaagctcaatcaaagccttcaaaagacatcttgcca
attgctaaagaactttctgatccattgaaagaacttatacagacacaaggagatgtagtg
gcagaaggcattcttgatattttgccagatggttacggatttttaagagtagaaaacttt
gttcaagggcctaaagatatatatatttctcaatcgcaaataaggcgttttggcttaaaa
gttggcgacaaagtaagaggtattacaaggattcctagagaaggggaaaaatattctgca
attctttatgtggaatctataaatggtgaagatcccgaaaatgctaaaaaaaggattccc
tttgatgaattaactcctattttcccaaatgagaaattgagattagagacttcacctaca
gaattttccatgagattggtagatatcattgctcctataggtaaagggcaaaggggtatg
attgttgcaccgccaaaagcaggaaaaaccactttacttaagcaaattgccaatagcatt
tcacaaaaccatccagaagttattctcattgtgcttttaattgatgaacgccctgaagaa
gtaactgacatgaaacgttctataaaaggagaagtagtatattctacttttgatgaactc
ccagaacaccatactaaagtggctgaaatggtattagagcacgctaaaagacttgtggag
tataaaaaggatgtggtgattcttttagatagtattactaggttagcgagagcttataac
cttattacacctccttcaggaagaactctttctggtggcattgacccttctgcattacat
cctccgaaaagattttttggagcagccaggaatatagaagagggtggaagtttaactatc
cttgctactgctttgattgaaacgggaagccgcatggatgaagttatatttgaagaattt
aagggaacgggcaatatggaacttcaccttgacagaaaattacaagaaagaaggatattc
cctgctattgatatatacaaatcgggtacaagaaaagaagaattgctgcttactaaagaa
gaattggaggccatgtggatattaaggaaagccatgtcaaatttaccgcctgcagaggtt
acagagatgttaattgaaaaattaatacgaactaaatctaatgcggagtttataaatatg
ataagagcacaattatataaatcttga
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