Thermoanaerobacter sp. X514: Teth514_0952
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Entry
Teth514_0952 CDS
T00648
Name
(GenBank) ATP dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
tex
Thermoanaerobacter sp. X514
Pathway
tex03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Teth514_0952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tex03400
]
Teth514_0952
Enzymes [BR:
tex01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Teth514_0952
DNA repair and recombination proteins [BR:
tex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Teth514_0952
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
PI_PP_I
Motif
Other DBs
NCBI-ProteinID:
ABY92253
UniProt:
B0K5X7
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All DBs
Position
complement(974621..975544)
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AA seq
307 aa
AA seq
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MSMIEEKISPMLASSSDPFDSPEWIYEIKWDGSRTIAFLSNKTRLQDRRLVDITHQFPDL
ALLYKQIKAKEAILDGELVVLKNGKPSYKSIMSRKHQQNLVKINLLSKIMPVIFITWDIL
YLNGKSLVELPLIERKDILRKTVKENEIIKISDFIFEHGKMLFEETGKRGLEGIVAKKAD
SKYLIGKRSKLWLKSKHFIVINAVIIGYRTDKTALILGLYDEENNLINIGSCESGLSQKE
LKAFYEVAKEIKAPDNYYNFKEKNVQWLKPLLTCKVRFMEWSENMKMRTPSFIQFEYNVK
PEECRFE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgatagaagaaaaaatatcacctatgctggcatccagtagtgacccttttgat
agccccgaatggatatatgaaatcaaatgggatggttcaaggactattgcctttctttca
aataaaacaagacttcaagatagaaggcttgttgatataacccatcagtttccagatttg
gcattactttataagcaaataaaagcaaaagaagcaatacttgacggtgaacttgtagtt
ttaaaaaacggcaagcccagttacaaaagcattatgtcgagaaagcatcaacaaaattta
gtaaaaataaatcttttaagcaagataatgcccgtaattttcataacatgggatatatta
tacttaaacggcaaatctcttgtagaattgccacttatagagagaaaagatatacttaga
aaaacagttaaagaaaatgagatcataaaaatatcagattttatatttgaacatggaaaa
atgctttttgaagagacaggcaaaagaggacttgaaggaattgttgccaaaaaagcagat
tcaaaatatttaataggaaaaaggagtaaactctggcttaagtcaaaacattttattgta
ataaatgctgttattatagggtacagaactgacaaaacagccctcatactggggctttac
gatgaggaaaataatttaataaacataggaagttgtgaatcaggcctatcccagaaggaa
ttaaaagcattctatgaagttgccaaggagataaaagccccagataattattataacttt
aaagaaaaaaatgtgcagtggttaaaacccctactgacatgtaaagtgagatttatggaa
tggtctgaaaacatgaagatgaggacaccttcttttatccaatttgagtataatgtaaag
ccagaagagtgcaggtttgaataa
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