Thermoanaerobacter sp. X514: Teth514_1178
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Entry
Teth514_1178 CDS
T00648
Name
(GenBank) uncharacterised P-loop ATPase protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
tex
Thermoanaerobacter sp. X514
Brite
KEGG Orthology (KO) [BR:
tex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tex03019
]
Teth514_1178
Messenger RNA biogenesis [BR:
tex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Teth514_1178
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_23
SKI
AAA_28
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABY92472
UniProt:
B0K6J6
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Position
1213564..1214418
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AA seq
284 aa
AA seq
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MRFVIITGLSGAGKTQALKAMEDMGFFCIDNFPPALLPKLADLFYHSKNVDKVALGMDLR
GGQFFEDIYSSLEFLKKNNYDYEIVFLEASDEVLIKRFKETRRKHPLSEEGRIVDGINEE
RKRLAEIRKIANSIIDTSNLTSSQLKEELSNIFLKGKKFKGIIIDIMSFGYKYGIPLDAD
LVFDVRFLPNPFYIEELRPLTGNDDKVKEYVMKWEEAKEFLKKLGDMIKFLIPYYIREGK
SQLVIAIGCTGGKHRSVTIANALYEFLKKEDYSVILHHRDIGEE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttgtcataataacagggctttctggcgctggaaaaacacaggcattaaaagcg
atggaggatatgggctttttttgtatagataattttccacctgctcttcttccaaaactt
gctgaccttttttatcactcaaaaaatgttgataaggtagcccttggtatggatttaaga
ggtggccagttttttgaggacatctattctagccttgagtttttgaaaaaaaacaactac
gattacgaaatagtttttttggaagcttctgacgaggttttgataaagaggtttaaagaa
accagaagaaaacatcctctctctgaggaaggtagaatagttgatggaataaatgaggaa
agaaagagacttgcagaaataaggaaaattgccaatagcataatagatacttctaattta
acttcttcccagttaaaagaggaattgtctaatatctttttaaaagggaaaaagtttaaa
ggaatcataatagatattatgtcttttggatataaatatggaatacctcttgatgctgac
cttgtatttgatgtgaggtttttgcctaatcctttttatattgaagagttaagaccttta
acaggaaatgatgataaggtaaaagagtacgtgatgaagtgggaggaagcaaaggagttt
ttaaaaaaattaggggacatgattaaatttttaatcccgtattatataagagaaggtaaa
tctcaacttgttatagctattggatgcacaggaggaaagcataggtctgttactattgca
aatgccctttatgagtttctaaaaaaagaagattattctgttattttgcaccatagagat
ataggagaggagtaa
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