Tetragenococcus halophilus YJ1: GLW17_00485
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Entry
GLW17_00485 CDS
T06306
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
tey
Tetragenococcus halophilus YJ1
Pathway
tey03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GLW17_00485 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tey03400
]
GLW17_00485 (uvrA)
DNA repair and recombination proteins [BR:
tey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GLW17_00485 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GLW17_00485 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
AAA_33
nSTAND1
AAA_22
AAA_25
nSTAND3
Viral_helicase1
AAA_18
AAA_23
AAA_14
BCA_ABC_TP_C
SLFN-g3_helicase
NACHT
AAA_24
cobW
DnaJ_CXXCXGXG
MMR_HSR1
NB-ARC
NTPase_1
T2SSE
PRK
MeaB
Septin
LBP_M
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
QGP75433
UniProt:
A0AB37D0T7
LinkDB
All DBs
Position
107860..110685
Genome browser
AA seq
941 aa
AA seq
DB search
MPNDNIVIHGARAHNLKNVDVTIPRDELVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGHP
ICPNDHVEITSQSPEQMVDQVLELPERSRIQLLAPVISQKKGQHKKTLGQVQKEGYVRVS
VDHEIYDITEVPELEKNKKHDIAIVVDRIVIKEGIRSRLFDSLESALRLSDGYAIVDVTD
GEDMLFSEHYSCPYCGFTVGELEPRLFSFNAPFGACPECDGLGIKLEVDIDLVVPDQTKT
LRQGAIVPWNPISSQYYPQMLEQACQDFGIDMDTPFEELTKEQQDIVLNGSNGRHFHFHY
KNDFGNVRDVDMPFEGVMVNIKRRYHETNSDFTREQMRLYMTELTCQLCHGYRLNDKALS
VKINGEHIGEVSDLAINYAYDFVEDLKLSQQEQMIAQPIVKEIGDRLSFLQNVGLDYLTL
SRSAGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLLGSLKKMRDLGNT
LIVVEHDEDTMRSADYLIDVGPGAGDYGGEIVASGTPEQVAENPHSLTGEYLSGRRKIPL
PKKRRKGNKKNITLTGAQENNLKNINVKFPLGKFITVTGVSGSGKSTLINDILRKALAQR
LNKNSKKPGKFKKITGSENIEKIINIDQSPIGRTPRSNPATYTSVFDDIRELFAQTNEAK
IRGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDIYVPCEVCHGKRYNSETLEVHYKG
KNISEVLDMTVDDAFDFFQNIPKISRKLQTIVDVGLGYVKLGQPATTLSGGEAQRMKLAS
ELQKNSNGKNFYILDEPTTGLHSDDILRLLQVLDRLVDAGNTVLVIEHNLDVIKSADHVI
DLGPEGGENGGTVIVTGTPEQIAASPDSYTGQYLKKLVEKS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacgataatatagtgatacatggtgctcgtgcccataatttaaaaaatgtagat
gtgaccattcccagagatgaactggtagtggtcacaggtttgtctggatcaggaaaaagt
tctttggcttttgataccttgtatgcagaaggacagcggcgttatgtggaaagtctgtct
tcttatgccagacaatttttaggtcaaatggataagccggatgttgatagtattgatggt
ttaagtccagctatttcgattgaccaaaaaacgactagcaaaaatcctcgttcaaccgtc
ggtacagtgaccgaaatcaatgattatttgcggctactgtacgctcgtgttggacatccg
atttgtcctaatgaccatgtggaaattaccagtcagtcaccggaacaaatggttgatcaa
gtccttgaattaccggaaagaagtaggattcaactacttgcacccgtcatctctcaaaaa
aaaggtcaacataagaagactttggggcaggtacaaaaagaaggatatgtacgtgtaagc
gttgatcatgagatttacgatatcacagaggtgcctgaacttgagaaaaataaaaaacac
gatattgcgatcgtggtagatcgtatcgtcattaaagaaggcattcgttctcgtctattt
gattctcttgaatcagcgcttcgattatctgatggttacgccattgtcgatgtgactgat
ggagaagatatgctttttagtgaacattattcttgtccttactgtggttttacagtaggt
gaattagaaccacgtttattctcttttaatgcgccttttggtgcttgtccagagtgtgac
ggtttagggataaaattagaagtagacattgatttggtcgttcctgatcaaacaaaaact
ttacgtcagggggccattgttccttggaatcctatcagttctcaatattatccgcagatg
ttagaacaagcttgtcaggattttggaattgatatggatacgccctttgaagagcttaca
aaagaacagcaagatattgtattaaacggttctaatggtcgtcacttccattttcattat
aaaaatgattttggcaatgttcgcgatgtagatatgccttttgaaggggttatggtcaat
atcaaacgtcgctatcatgaaacaaacagtgactttactagagaacaaatgcgcttgtat
atgacagagctgacttgtcaactttgtcatggttatcgtttgaatgataaggcgctttcc
gtgaaaataaatggggagcatatcggagaagttagtgatctagcgattaattatgcctat
gattttgttgaagatctcaaattatcacaacaggaacaaatgattgcgcaacctatcgtt
aaagaaatcggagatcgtttgagctttttacaaaatgttggtttagattatttgactttg
agtcgttcggcaggcactctttctggcggtgaagcacaacgaatccgtttagcaacgcag
atcggttctaatttatctggggtattatatattctagatgaaccttctattggcttacat
caacgagataatgatcgtttgctaggctctttaaagaaaatgcgtgatttaggcaatact
ttgattgtggtggaacatgacgaagatacaatgcgctcggctgactatttaatcgatgta
ggtccaggagcaggagattatggtggcgaaatcgtagcttctggtacgccagaacaagtg
gccgaaaatcctcattctttaacaggtgagtatttaagcggaagaagaaaaatcccttta
cctaaaaaacgtcgtaaaggaaataaaaaaaatattactttaacgggtgcccaagaaaat
aatttgaaaaatattaatgttaagtttcctcttgggaaatttattacagtaacgggtgta
tcaggttcgggtaaatcaactttaattaatgatatcttaagaaaagcccttgctcagcgt
ttgaataagaattcaaaaaaaccagggaaatttaaaaagatcacaggttctgaaaatatt
gaaaaaattattaatattgatcaaagtcccattggcagaacccctcgtagtaacccagct
acttatacgagtgtgtttgatgatattcgtgaactatttgcgcaaacgaatgaagcgaaa
atacgtggttataagaaaggacgttttagttttaatgtcaaaggtggacgttgcgaagct
tgtaaaggcgatggtatcataaaaattgaaatgcactttctaccagatatttatgttcct
tgtgaagtttgccatggtaaacgatataattccgaaactttagaagtacattataagggt
aaaaatatctcagaagtactagatatgaccgttgatgacgcttttgactttttccaaaat
attcctaaaatcagtcgtaaacttcaaacgattgtggatgtaggcttaggttatgttaaa
ttgggtcagccggcgactactttatctggcggagaagcgcaacgaatgaagttggctagt
gaactacaaaaaaattctaacggtaaaaacttttatattctagatgaaccgactaccggc
ttacattcagacgatattcttaggttattacaggtgctagatcgtttagtcgatgccggc
aatacagttttagtgattgaacataatttagatgtaataaaatctgctgaccacgtgatt
gatttagggccagaaggtggagaaaacggtggtacggttatagtaacaggtacgccagaa
caaattgcagctagtccggatagctatactggacagtatttaaaaaaattagttgaaaaa
tcatga
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