Tetragenococcus halophilus YJ1: GLW17_00540
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Entry
GLW17_00540 CDS
T06306
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
tey
Tetragenococcus halophilus YJ1
Brite
KEGG Orthology (KO) [BR:
tey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tey03400
]
GLW17_00540
Enzymes [BR:
tey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GLW17_00540
DNA repair and recombination proteins [BR:
tey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GLW17_00540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QGP75442
UniProt:
A0AB37D0X1
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All DBs
Position
120171..123728
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AA seq
1185 aa
AA seq
DB search
MSLQFITGDGSCDHEKAVLDIACDWLAKDHNEVFFLVPNYNKFEREQEILSQLKHRQEKK
DFSTIRGQVYSFNRLAWYFLQDSENISGQTISDTGSAMIMRKVLLTVSDQLIIFRGEINK
EGFIAKLLELYKEFQLGNITVDTLSFLPTSQETTKAKDFELKMYEIRLIFTAYEEELAKR
NLQVEQPISMLTNFLAASDLQDTAQLEQKLFIVTGFSNFSMQEQELLKVLFGKSHVCIDL
YVDSVHTDSDALDLFFDPKQTYHLLKNFAQNQQSHVLFDKKAPLLNNVSTSYLELERCFR
QTNHGRYEQAGALSDHVEIWKAENPEEELRQVATEIRRLVSHSFNKGEKPLYYRDIQLLT
LNPDLYYSFIPSVFAELDIPFYLDEDRQMKQHPLVEFIQALFALDNYYYRTSDVFRFLRT
ELYIPKQLQEETQDWQKARDKYRWMVDITENQALAHNFHGADWTREQDWRLFNFDFEKEV
LMETENTEVLTNRLRNNFRKDIVSFFTSLKAADTTKEAIIDFYQFLQKIGVEQQLIHWRE
QEIAWGNLEQARDHEQTWASLMDLLDELVEIYGEDPFDLDLFKEILSSGLENLTFGKVPT
AIDQVQINPLDLTRPLQAKVTFAIGLDETSFPRTVENKSLISTEERQQLNENLQPGQYLK
DQAEETIRKEPFVAYNMLLSASEKLYLSYPKNADSKQNIKMSSYLARILKWTDLTLQDRC
SLDLTCDPHHYVGSYKSLIRQLNSLYRQAQEEKSSLSGKWQSLKDLLLMSDYRSLTTRVF
ESQVHRNVPVNLSPELAEQLYGKNIYSSISQIETFYDYQYDYFLKFGLGLKEREIYGLNS
AMTGEIFHEALDNFLKAVFQEDLSLTQMSEEQRQLLIDRVLKNIFGQERYAFMEKNARMS
FIRYRLGKTVQHVSWGLKKQAEKTQLTPVQTEVLFGEIAGNQGIPGLEIPLSNGGKLYLR
GKIDRVDTTTIDGKPWLAVMDYKSSAHQFDITDSYYGLAMQLLTYLDIALKDAVELIGKK
DVSGAGAYYFHVYDPILDPKKASEKERLKQYKLDGLFADDPEVFEAFDETLNKSEHSLVF
PIQKDKNEQIKGSVRSKEKFYTIEEMNTLMAHNRKKLKEAAEKILSGEIKMNPSYKMKDK
RRATQYSPFRSISLFDPMLEENDYHRIHSLSKEEIMERLKEEKDD
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttacaatttataaccggagatggtagttgcgaccatgaaaaagcggtattagat
atcgcttgtgactggttagcaaaagaccataatgaagtcttttttttagtccctaattac
aataaatttgaacgtgaacaagaaattttgtcgcaattaaaacataggcaagaaaaaaaa
gattttagtacgattcgtggacaagtttatagttttaaccgtttagcatggtatttttta
caagatagtgaaaatataagcggacaaacaatttcggatacaggttcagctatgatcatg
cgtaaagttcttctaacagtaagcgatcaacttattattttccgaggtgagatcaataag
gagggttttattgcaaaattacttgaactttataaagaatttcagttgggcaacattaca
gttgatacgcttagttttcttcctactagtcaagaaacaactaaggctaaagattttgaa
cttaaaatgtatgaaatcagattgatatttaccgcttatgaagaagaactggctaaaaga
aacttacaagtagaacaaccgatttcgatgttaactaattttttagcagctagtgattta
caggatacagctcagttagaacaaaagctttttatagtcactggtttttcgaattttagt
atgcaagaacaagaacttttaaaagtcttatttggtaaaagtcatgtgtgtattgatctg
tatgttgactctgtgcatacagatagtgacgccttagatttattttttgatccaaaacaa
acttaccatcttttaaaaaactttgcgcaaaatcaacaaagccatgtcttatttgataaa
aaggcccctcttttaaataatgtatctactagttacttagagttagaacgctgtttcaga
cagacgaatcatggaagatatgaacaagcaggtgctctgagtgatcatgtggaaatttgg
aaagccgagaacccagaagaagagttaagacaagtagcaacagagattcgacgattagtt
tctcattcatttaataaaggggagaagccactttattatcgggatattcagctattaact
ttgaatccggacctatattattctttcattccgtcggtttttgcagaattagatattcct
ttttatttagatgaagatcgacagatgaaacaacaccccttagtagaatttatccaagct
ttatttgctttagataattattattaccgaacatctgatgttttccgtttcttacgtacc
gaactatacataccaaagcaattacaagaagaaacacaagattggcaaaaagcacgcgat
aaataccgttggatggttgatataacggaaaaccaagccttagcacataattttcatggc
gctgactggactcgtgagcaagactggcgtttgtttaattttgattttgaaaaagaagtt
cttatggagactgaaaatacagaagtccttacaaatcgcctgcgtaataactttcgtaag
gatatcgtcagcttttttaccagtttaaaagctgcagatacaacgaaagaagcaattata
gatttttatcaatttttacaaaaaattggtgttgaacagcagttgattcattggcgagag
caagaaattgcatggggaaatttggagcaagcacgtgatcacgaacaaacatgggcttct
ttgatggacttattagatgaacttgtagaaatctatggggaagacccttttgaccttgac
ctttttaaggaaatactatctagcgggctggaaaatcttacatttggtaaagttcccacg
gctattgaccaagtacaaatcaatccattagacttaactcgtcctttacaagcaaaagtc
actttcgcgattggcttagacgaaacaagttttcctcgtactgtggaaaacaaaagcttg
atttctacagaagaaaggcaacaactaaacgaaaatttacagccaggacaatatttaaag
gatcaagcagaagaaacgattcgtaaagagccttttgtcgcttataatatgttattgtca
gcttctgaaaaattatatttaagctatcccaaaaatgcagattccaagcaaaatatcaag
atgtcttcttatcttgctcgtatattaaagtggactgatctaacgctgcaagatcgatgt
agcttggatttaacttgtgatccgcatcattacgttggaagctataagagcctaatccgc
caattgaacagcttatatcgtcaagcacaagaggaaaaaagctctctttccgggaaatgg
caatccttaaaagacttactcttgatgtctgattatcggtcattaacaactagggtattt
gaaagtcaagtgcatcgtaatgttccagtgaacctctcacctgagttggctgagcaatta
tatgggaaaaatatttatagctcgatttcacaaatagaaactttttatgattatcagtat
gattatttccttaaattcggtttggggctaaaagaaagagaaatttacggtctcaattct
gcgatgactggagaaatcttccatgaggctttagataactttttaaaggctgtttttcaa
gaggacctttcactgacgcaaatgtcagaagaacagcgacaacttttaatcgatcgtgtg
ttaaaaaatatatttggacaagagcgttatgcttttatggaaaaaaatgctcgtatgagt
tttattcgttatcgtttaggcaaaacagtccaacatgtttcctgggggttaaaaaaacag
gctgaaaaaacacaattaacgcctgttcagactgaagtcttatttggagaaattgcagga
aaccaagggattcccggtttagaaatccctttatctaacgggggcaaactttatctaaga
ggaaaaattgatcgtgtcgacacaacgactattgatggaaaaccttggcttgcggtgatg
gactataaatcaagcgctcatcagtttgatattaccgatagttactatggtcttgccatg
caactgctcacttatttagatattgctttaaaagatgctgttgaactcataggcaaaaaa
gatgtaagtggtgctggtgcttattacttccacgtttacgatcctattttggaccctaaa
aaagctagtgaaaaggaacgcttgaagcaatacaaacttgatgggctttttgcagatgac
ccggaagtgtttgaagcttttgatgaaacgctaaataagtccgagcattcactagtattt
cctatccaaaaagataaaaatgagcaaataaaaggctctgttagaagtaaagaaaagttt
tatactatagaagagatgaacacgctgatggcacacaatcgcaagaagttaaaagaagcg
gctgaaaaaatactttctggtgaaattaaaatgaatccttcttataagatgaaagataaa
aggcgagcaacacaatattctccgtttcgtagtatctctttatttgatccgatgttagaa
gaaaatgactatcatcgcattcattccttatcaaaagaagaaattatggaacgcttaaag
gaggaaaaagatgactga
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