Tetragenococcus halophilus YJ1: GLW17_00545
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Entry
GLW17_00545 CDS
T06306
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
tey
Tetragenococcus halophilus YJ1
Brite
KEGG Orthology (KO) [BR:
tey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tey03400
]
GLW17_00545 (addA)
Enzymes [BR:
tey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GLW17_00545 (addA)
DNA repair and recombination proteins [BR:
tey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GLW17_00545 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
NPHP3_N
AAA_12
AAA_30
HSF_DNA-bind
AAA_16
NACHT
ExsD_C
AAA_22
DUF7413
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QGP75443
UniProt:
A0AB37D2I6
LinkDB
All DBs
Position
123721..127398
Genome browser
AA seq
1225 aa
AA seq
DB search
MTDIPLKPKNETFTDKQWQAVFDTGDNLLISASAGSGKTTVLVRRVIEKLKSGSNIDELL
IVTFTEAAAREMKERIQSSLQDAINKESQQARRNHFVKQLSLLPRAHISTLHAFCLTVIR
RFYFLIDLDPVFRMLTDNTERILLKEEVWEELRDEYFEASDQEFYQLAENFSSDRSDDGF
TDLIMSLYNFARANPDSTTWLNQLVQSYDTTHGLAGNQMYQTQVKPLVLANLQTAIGQLQ
AALQVAQSLESMEKAVVVVANDLEQANRLYAYIKEDNVEQVYAQLTSFDFKRYPTYKKEE
EKELSKQFIKPRRDHAKELIKDSETFFAQPPEKMLELMEQAKPLVKKMSEVTLSFIDRYQ
KRKQAKGVLDFNDLEHYALDILQANGEGSEASSYYRDRFEEVLVDEYQDTNRLQEAILFW
IRKPDPAQGNLFMVGDVKQSIYAFRLADPTLFVDKYLAFAQQNGGRRIILAENFRSRKEV
LHFTNLVFEQLMDEKVGQIPYDEAAQLVPGFSDFPESDAFNTELLLYEKEVEEDPTVVDD
KTEGELYLVALKIKELVENKFMIYDKHAKEKRAVTYNDIVLLTPTRKNNLVIMDIFKQFQ
IPLEVNDAQNYFQASEIQIMISLLEIIDNPYQDIPFVAVLRSPIVGLNEEELTKIRLAKK
NDDYYKAFLAYLSEDDELASRLRTFNEQLELWRTLARRRSLSELIWSIYQETAYLDYVIG
LPSGRQRHANLVALAQRAETYEKSSFRGLYQFIRFIEKMQEKDKDLAEPLALTQENAVKV
MTIHASKGLEFPLVFLLDMTKQFNYSDFSTRYIFEERLGAGIQYIDQAQVRYDTLPYQAI
KQQRIQKMLSEEMRKLYVALTRAEQKLYLVGSYKTKEEALKNWQQALDQENLVLDPALRL
KSKGNLMDWVGMTLMRHPDMQKIFAETKDSKKVLNHPAHFEIHWVNQAELQKELNKPQTS
VAEDFSLSTSEKTEIDDLQQRLDFVYPLEKSTKTTSYQSVSEMKRLYNDPDDQQLNRISW
QSNIEQQQAQHYRYVTQDLAKPKFMQADRIDPTTVGSATHSLLQLIPLTTLPTFDSIQEK
LRQLVNNHQIEKQVAEKIDLTAILWFFQTELGKEILKKPQLVHREQPFSMLKDARDVFLD
FHEADAELLIHGIVDGFIEYEDHVILYDFKTDAVYNEISRQQFIAKYQGQLRLYRQALEQ
ALNKPVQHTFLVLLNSKENIELFTE
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgactgatattcctttaaaaccaaaaaatgaaacatttactgacaaacaatggcaagca
gtatttgacactggtgataatttactaatatctgcttcagcaggttcaggaaaaacgact
gttttggtacgtcgtgtgattgaaaaattaaagagtggaagtaatattgacgaattattg
attgtcacctttaccgaagcagcagctagagaaatgaaagagcgtattcaaagctcttta
caagatgcaattaataaagaaagtcagcaagcgcggcgtaatcactttgttaaacagcta
tctttactacctcgagcccatatttctactttgcatgctttttgtttaacggttattcgc
cgtttttactttttgattgacttggatccagtatttcgtatgcttactgataatacggag
cggatattattaaaagaagaggtttgggaagagttacgggatgaatactttgaagcttct
gatcaggaattttatcaattagcagagaatttttctagtgatcgctcagatgatggattt
actgatctgatcatgtctttatataattttgctagagccaatcctgattcgaccacttgg
ttaaaccagctggtacaaagttatgatacgacacatggtttagcaggaaatcagatgtat
caaacccaagttaaaccgcttgttttagctaatttacaaacggctattggtcaactacaa
gcagctttgcaagtagctcaaagtttggaatcgatggaaaaagcagtcgttgtagtcgcc
aatgatttagaacaagcgaatcggttatatgcttatatcaaggaggataatgtagaacaa
gtttacgcgcagttaacaagctttgactttaaacgctatccaacttataaaaaagaagaa
gaaaaggaactatcaaagcaattcattaaacctcgacgtgatcatgctaaggaactcatt
aaagattctgaaacattttttgcgcagcctcctgaaaaaatgctcgaattaatggagcaa
gccaaacctttagttaaaaagatgagcgaagtaactttaagctttattgatagatatcaa
aagcgtaagcaggctaagggtgtattagattttaatgatcttgaacattatgccttagat
attttacaagctaatggcgaaggtagtgaagcttcttcttactatagagatcgttttgaa
gaagttctagttgatgagtaccaagataccaatcgcctgcaagaagctattttgttttgg
atccgtaaaccagatcccgcacaaggaaacttattcatggtaggagatgtgaagcaatct
atttatgcctttcgcttggctgatccgacattatttgtagataaatacttagcttttgca
cagcaaaatggtggccgaagaattattttagcggaaaactttcgttctagaaaggaagta
ctacactttaccaatctggtatttgagcaattgatggatgaaaaggtaggtcagatccct
tatgatgaagcagctcaattagtccctggtttttcagattttcccgaaagtgatgcattt
aatactgagttactcttatatgaaaaagaagttgaagaagatccaacagtcgttgacgat
aaaactgaaggagaattatatctggttgcgctaaagatcaaagaactagttgaaaataag
tttatgatctatgataaacatgctaaagaaaaacgggctgttacttacaatgatattgtg
ttattgacgccaacacgcaaaaataatctagtgattatggacatatttaaacagtttcaa
attcctttggaagtcaatgatgcacaaaactactttcaagcatcagaaatccaaattatg
atttcactattagaaattatcgataatccttatcaggatattccttttgtagcagttctg
cgctctccgatagttggtttaaatgaagaagagctaactaaaattcgtttagctaaaaaa
aatgatgattattataaggcatttttggcgtatttgtcagaagacgacgaacttgctagt
cgactgcgaacttttaatgaacaattagaattgtggcgaacattagctagaagacgttca
cttagtgaattgatctggtcgatttatcaagaaacggcctatttagattacgtcattggc
cttccttcaggtcggcaacgtcatgccaacttagttgctctagctcaacgggcggaaact
tatgagaagagtagttttagaggtttgtatcagtttatccgttttattgaaaaaatgcag
gaaaaagataaggacttagccgaaccacttgccttaacacaagaaaacgcggtaaaggtt
atgacgatccacgctagtaaaggactcgaatttccgttggttttccttttggatatgact
aagcagtttaattatagtgatttttcgacacgctatatttttgaagaacgtttaggagca
ggtattcaatatatagatcaagcacaagttcgttatgatactttgccctatcaagcaatc
aaacagcaaagaattcaaaaaatgctatcagaggaaatgcgtaagttgtatgttgccttg
acccgagcagaacagaagctttatctagttggttcctacaaaactaaagaagaagccttg
aagaattggcaacaagcgctagatcaagaaaatttggtgctagatccagctttacgttta
aaaagcaaaggaaacttaatggactgggtaggaatgactttgatgcgtcatccagatatg
caaaaaatttttgctgaaaccaaagatagtaaaaaagtgcttaatcatccagctcatttt
gaaatacattgggtaaaccaagcagaactacaaaaagagttgaataagccgcaaacatca
gttgctgaggatttttcattaagtacttcagaaaaaactgaaatagatgacttacagcaa
cgtttagactttgtttacccattggaaaaatcaaccaaaaccacaagttatcagtccgtt
tctgagatgaaacgtttgtataacgatcctgatgaccagcagcttaatagaatctcttgg
caaagcaatatcgagcagcagcaagcgcaacattatcgatatgtaacacaagatttggct
aaacctaaatttatgcaagcagaccgtattgatccaacgactgtaggcagtgcgactcat
agtttattacagttgatcccattaacgactttgccaacatttgacagtatacaagaaaaa
ttaagacagttagtcaataaccatcaaatcgaaaaacaagttgctgaaaaaattgattta
actgctattctgtggtttttccaaacggaactaggcaaagaaattttaaaaaaaccacaa
cttgtccatcgtgaacaaccattttctatgctaaaagatgctcgagatgtatttttagac
tttcatgaagcggatgctgaattattaatacacggtattgtcgacggctttatcgaatat
gaggatcacgttattttatatgacttcaaaacagatgctgtgtataatgaaataagtaga
caacagttcattgctaagtatcaagggcaattacgcttatatcgacaagctttggaacag
gcactaaataaacctgtgcagcatacttttttagttcttttaaatagtaaagaaaatatt
gagttatttactgagtga
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integrated database retrieval system
