Tetragenococcus halophilus YJ1: GLW17_00820
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Entry
GLW17_00820 CDS
T06306
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
tey
Tetragenococcus halophilus YJ1
Brite
KEGG Orthology (KO) [BR:
tey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tey03019
]
GLW17_00820
03009 Ribosome biogenesis [BR:
tey03009
]
GLW17_00820
Enzymes [BR:
tey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLW17_00820
Messenger RNA biogenesis [BR:
tey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GLW17_00820
Ribosome biogenesis [BR:
tey03009
]
Prokaryotic type
rRNA helicases
GLW17_00820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2608
Helicase_RecD
PhoH
CMS1
Mob_Pre
Annexin_2
Motif
Other DBs
NCBI-ProteinID:
QGP75491
UniProt:
A0AB37D175
LinkDB
All DBs
Position
180699..182045
Genome browser
AA seq
448 aa
AA seq
DB search
MTFESFAFQPFIYQALNESGFETPTEVQEKLIPLIQKRRNIVGRSQTGTGKTHTFLLPLI
DQVEVDKDEVQVVITTPSRELAEQIYQAAKQITAFAPKDIRVSKFVGGTDKQRQLEQLQH
QQPQIVIGTPGRILDMVNENALLIYKSRAFVVDEADMTLDLGFLPEVDQIATKFSEDIQM
MVFSATIPEKLRPFLKKYVTHPVVEDIKPQSLIADTIENWLISTKGRDKNQLIFQLLTIG
QPYLAVVFANTKEHVDEISDFLQNQGLKVATIHGDIPARQRKRIMRQIHHLDYQYIVATD
LAARGIDIEGISHVINAELPRDLDFFIHRVGRTGRKQLKGTAITLYDPSDEYAINSLEKM
GIDFEPKEIKQGEIVTTYDRNRRQKREKTSEELDPETIGYVKKQKKKVKPGYKKKIKQEI
NKSNQEKRKLERRKQQRAARREKKNSNR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacctttgaatcattcgcatttcaaccatttatttatcaagcattaaatgaaagtggc
tttgaaacacccacagaagttcaagaaaaattaattcctttgatccaaaaaagacgtaat
attgtagggcgatcacaaacaggcacgggcaagacgcacacctttttacttcctttgatc
gatcaagtggaagtagataaagatgaagttcaggttgtcattacaacaccaagtagggaa
ttggcagaacaaatttatcaggcggctaaacagattaccgcatttgcgcctaaggatatt
cgcgtctcaaagtttgtgggcggtaccgataaacaaagacaactggaacagttgcagcat
cagcaaccccaaatagtcattggtactcctgggcggattttagatatggtcaatgaaaat
gcactgcttatttataaaagccgagcattcgttgttgacgaagctgatatgacactggat
ctagggttcttgcctgaagtagaccagattgctacaaaattttcagaagatatacagatg
atggtgttttctgcgactatcccggaaaagttgcgtccatttttaaaaaaatatgtaaca
catccggtagttgaagacataaagccgcaatccttgattgctgataccattgaaaattgg
ttgatttccacaaaaggaagagataaaaaccagttgatttttcaattactaaccatcggt
caaccttatttagctgtcgtctttgctaacactaaagaacatgtagatgaaattagcgat
tttttgcaaaatcaaggattaaaagtagcgacaatccatggagacattcctgctagacag
cggaaacggatcatgcgacaaattcaccatctggattatcaatatatcgttgctacagat
ttagcagctcgtgggattgatatcgagggaatcagtcacgtaattaacgcagagctgcct
cgtgacttagatttcttcattcatcgggtagggcgaacaggtcgcaagcaattaaaagga
acggctattacgctatatgatcccagtgatgagtatgccatcaattcactagaaaaaatg
gggatcgactttgaacccaaagaaatcaaacagggagagattgttacaacttatgaccgt
aatcgacgtcaaaaaagagagaaaacttctgaagagttggatcctgaaacgattggttat
gttaaaaaacaaaagaaaaaagtaaaaccaggttataaaaagaaaatcaaacaggaaatt
aataaaagtaatcaagaaaaacgtaaattagaacggcgaaaacaacaacgagccgcaaga
agagaaaagaaaaattcaaatcgttaa
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