Tetragenococcus halophilus YJ1: GLW17_01150
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Entry
GLW17_01150 CDS
T06306
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tey
Tetragenococcus halophilus YJ1
Pathway
tey03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tey00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GLW17_01150
09124 Replication and repair
03420 Nucleotide excision repair
GLW17_01150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tey03021
]
GLW17_01150
03036 Chromosome and associated proteins [BR:
tey03036
]
GLW17_01150
03400 DNA repair and recombination proteins [BR:
tey03400
]
GLW17_01150
Enzymes [BR:
tey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GLW17_01150
Transcription machinery [BR:
tey03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GLW17_01150
Chromosome and associated proteins [BR:
tey03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
GLW17_01150
DNA repair and recombination proteins [BR:
tey03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GLW17_01150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QGP75547
UniProt:
A0AB37D154
LinkDB
All DBs
Position
complement(252893..255241)
Genome browser
AA seq
782 aa
AA seq
DB search
MFSEKISVRHLVEFILRRGNLSSQKNSNHTAQEGAKIHRKLQKAAGDNYQKEVFLKEETT
VENDKIIVEGRADGIFKENEDWIIDEIKTSEVQFEELEDDQIEMYFYQAMVYAYIYSLHN
ELTNIQVQLTYYQTIEEKTIQKRRSYEWSFLKDFFDKLIKEYHKWLIFQENWRDQRNKTL
QQMSFPYQEFRSGQRELAAAAYKTLRSQQELFIEAPTGIGKTISTLFPAFKALGEDRADR
IFYLTAKTITRQVAEDTLTVLADKGAQIKSVTITAKDKIRFPEEQEGNPDDSPYSIGYYD
RINEALWDILHHENQMTRSVIESYAKKHVVSPFEFSLDISLFCDVIIGDYNYLFDPTVYL
RRFFEDNSEAYYFLIDEAHNLVNRSREMYSASIHRQSFNSVFKSFSKNDKKILKNLKKID
QEFAAIEETAQESGWTFHHQKGQADTLLKLLFRFSELVKEWLAANEGNPQEEKILDLYFD
VLRFLKMSDFYDETYETTIEIMYHDLKIRQFCMSPAPFLADTLNKGKASLLFSASLTPLP
YYQEVLGGHREALRYRLASPFPEKNQQVFIADYIQTTYKKRNHSYQAIAQAIAEAVFAQK
GNYLVFFPSYKYLDDCYQIFREQFPEIDTIVQDTQMNEKEREDFLAKFVERPTQSLVGFC
VLGGVFSEGIDLKASRLVGSIIVGVGLPQMNHEQELIKEYFDEKEEKGFAYAYQLPGMNK
VLQAAGRVIRDSTDKGIVLLLDQRFTTKAYRQLFPAHWQNMKICHNLAQLKQGMESFWQE
VE
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgagaaaatttcggtcagacatctcgttgagtttattctacgtagaggaaat
cttagcagtcaaaaaaatagtaatcatactgcacaagaaggagcaaagatccatcgaaaa
ctacaaaaagctgcaggagataattatcaaaaagaagtatttttaaaagaagaaacaact
gttgaaaatgataagatcattgttgaaggtcgcgcagatggtatttttaaagaaaacgaa
gattggattattgatgagataaaaacttcggaagtacaatttgaagaattagaagatgac
caaattgaaatgtacttctatcaagcaatggtctatgcgtatatctactctttacataat
gagttaacaaatattcaagtacagctaacctattatcaaacgattgaagaaaaaaccatc
caaaaaagacgttcttatgaatggagttttttaaaagactttttcgataaattgataaaa
gaatatcataagtggttgatctttcaagaaaattggcgagatcaacgtaataaaacactg
cagcaaatgtcttttccctatcaagagtttcgtagtggacaacgcgaattagccgccgca
gcttataagactttacgtagccagcaagagctatttattgaagcccctaccggaataggc
aagacgatttctacactttttccagcgttcaaagctttgggagaagaccgcgcggatcga
attttttatttaacagctaaaacaatcactagacaagtggccgaagatacattaaccgtt
ttagcggataaaggtgcgcaaataaaaagtgtcaccatcacagcaaaagataaaatacgt
tttccagaagaacaagagggcaatccagacgatagcccttattctataggatattatgat
cgaatcaatgaagcactatgggacattttgcatcatgaaaaccaaatgactcgttctgta
attgaaagttatgcaaaaaaacatgtcgtttctccttttgaattctctcttgatattagt
ctattttgcgatgtgattattggtgattataactatttatttgatcctacagtatattta
cgtcgtttctttgaagataatagcgaagcgtattactttttgatcgatgaagctcataat
cttgtgaatcgttcgcgtgaaatgtattctgcttctattcatagacaatcttttaacagt
gtttttaaaagtttttccaaaaacgataaaaagattctcaaaaatctcaaaaaaatcgat
caagaatttgccgcaattgaagaaactgcgcaggaatctggctggactttccatcatcaa
aaaggacaggcggatactttgcttaaacttttatttcgttttagcgaattagtcaaagaa
tggttagctgcaaatgaaggaaatccacaggaggagaaaatcttagacctttattttgat
gttctacgatttttaaaaatgagtgatttttatgatgaaacttatgaaacaactattgaa
attatgtatcatgatttgaaaatccgacaattttgtatgtcaccagcaccatttttagcg
gatacgcttaataaagggaaagctagtctacttttttctgcgagtttgacacccttgcct
tattaccaagaagtattaggagggcatcgagaggcattacgttatcgtctagctagccca
tttccagaaaaaaaccaacaagtcttcattgccgattatatccaaacaacttataagaaa
agaaatcatagttatcaagcaatagctcaagctattgcagaagcagtttttgctcaaaaa
gggaattacttagtgttttttccatcttataaatatctagatgattgttatcaaattttt
cgcgaacaatttccagaaatcgatacgattgtacaagatacacaaatgaatgaaaaagaa
cgcgaagattttttggcaaaatttgttgaaaggccaacacaatctttggtcggcttttgt
gtattaggcggtgtattttctgaaggtattgacttaaaagcttcacgattagtaggcagt
attatcgtaggtgttgggctacctcaaatgaaccatgaacaagaattaattaaagaatat
tttgatgaaaaagaggagaagggctttgcatatgcttatcagctgccgggaatgaataaa
gtattacaagccgctggtcgtgtcattcgagatagtactgataaaggcattgttttactt
ttagaccaaagatttacgactaaagcctatcgccaactctttcctgcccattggcagaat
atgaaaatttgtcacaatcttgcacaattaaaacaaggaatggaaagtttttggcaagaa
gttgaataa
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integrated database retrieval system
