Tetragenococcus halophilus YJ1: GLW17_08240
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Entry
GLW17_08240 CDS
T06306
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tey
Tetragenococcus halophilus YJ1
Pathway
tey03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tey00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GLW17_08240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tey03021
]
GLW17_08240
03400 DNA repair and recombination proteins [BR:
tey03400
]
GLW17_08240
Enzymes [BR:
tey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GLW17_08240
Transcription machinery [BR:
tey03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GLW17_08240
DNA repair and recombination proteins [BR:
tey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GLW17_08240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
TUTase
Motif
Other DBs
NCBI-ProteinID:
QGP76787
UniProt:
A0AB37D5J6
LinkDB
All DBs
Position
1728700..1729638
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPRITKIDEEKDYGKFIVEPLERGYGTTLGNSLRRILLSSLPGAAITSIQIDGVL
HEFSTIKGVREDVAQIVLNIKGLALKLYSEEEKNLEIDITGPATITAGDIIVDSDVEILN
KDMYICTVAEGTRFHARLSVQPGRGYVQADENKKEDMPIGVLPVDSIYTPVRRVNYQVEN
TRVGRRGDYDKLTMELWTDGSIEPLDALSLSAKILTDHLEIFVNMTDEAKNTDIMVEKEE
TQKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKSEPEMIKVRNLGRKSLEEVKSK
LSDLGLGLRKDD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaattcgaaaaaccaagaatcacaaagattgatgaagagaaagattatggcaag
tttatcgtagaacctctggaaagaggctatggaactacattaggaaattccctgcgtcgt
attttgttatcttctttaccaggagcagcaatcacaagtattcaaattgatggcgtgtta
catgagttttcaacgatcaagggcgttcgtgaagatgtcgcgcaaattgttttgaatatt
aaaggtcttgcgttaaaactttatagcgaagaagaaaaaaaccttgaaatcgatattact
ggaccggctacaataactgctggcgatatcatcgttgatagtgatgtagagattcttaat
aaagatatgtatatctgtacggtggcagaaggtacaagatttcatgctcgcttatcagtg
caacctggacgtgggtatgttcaagctgacgaaaacaaaaaagaagatatgcccattggt
gtacttccagttgattcaatttatacacccgttcgtcgtgtgaattatcaagtagaaaat
acacgtgttggtcgccggggtgattatgataagctgacaatggaactttggacagatggt
tcgattgaaccacttgacgctttaagtttatcagcgaaaatccttacagaccatttagaa
atttttgtgaatatgaccgatgaagcgaaaaatacagacatcatggtcgaaaaagaagaa
acacaaaaagaaaaaatgttagaaatgacaattgaagagttggacttatctgttcgttct
tataattgtttaaaacgtgctggtattaatactgtacaagaattaacaaataaatctgaa
ccagaaatgatcaaagtacgtaatttgggccgtaaatctcttgaagaagtaaaatcaaaa
ttaagtgatcttggtctgggattacgtaaagacgattaa
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