Tetragenococcus halophilus YJ1: GLW17_09020
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Entry
GLW17_09020 CDS
T06306
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
tey
Tetragenococcus halophilus YJ1
Pathway
tey02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tey00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GLW17_09020 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tey02000
]
GLW17_09020 (abc-f)
01504 Antimicrobial resistance genes [BR:
tey01504
]
GLW17_09020 (abc-f)
Transporters [BR:
tey02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
GLW17_09020 (abc-f)
Antimicrobial resistance genes [BR:
tey01504
]
Gene variants
Macrolide resistance genes
Transporters
GLW17_09020 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_29
ABC_tran_Xtn
AAA_23
NACHT
NPHP3_N
AAA_28
ATP-synt_ab
Viral_helicase1
DUF5615
Motif
Other DBs
NCBI-ProteinID:
QGP76929
UniProt:
A0AB37D5P6
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All DBs
Position
1899583..1901073
Genome browser
AA seq
496 aa
AA seq
DB search
MSKIEIKNLTFGFDTLAEPLFEHTNLTIDTQWKLGLIGRNGRGKTTLLQLLLGEYVYSGA
ITHQLAFTYFPQKVLDKTQLTYDCLQTLAVFDLWEIERELNLLQTDPEILWRPFASLSGG
EQTKVLLALLFIDDRHFPLIDEPTNHLDITARQQVANYLKAKRNGFIVVSHDRSFVNEIV
DHVLSIEKSQLVLYQGNFSTYEEQKEQRDHYEQEENRKLKKEIGRLKQTAAEKAEWSRGR
ERDKQGNPNQKGSGAIYDTGAIGARAARTMKRSKAIVNRMEEKAEEKKGLLHDIEDVDSL
TINYQPSYHKQLLKVEKLQLSYTEQPLFSPISFEIEQGQRLAIQGANGSGKSSIIQFLLD
EFTGVASGKATFAHDLSISYVRQNYEDNTGTLQEFAQAHHLSYEELLNNLHKLGVERKVF
ANRIEKMSLGQRKRVELAKSLATPAELFIWDEPLNYLDVFNHEQLEAVIQSVQPSMLVVE
HEATFLKNIATKMIYL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaattgaaatcaaaaatttgacctttggctttgacaccctagccgagccattg
tttgagcacactaatttgaccatagatactcagtggaaattaggtttgatcggaagaaat
ggccgaggaaagacgacattacttcaattactattaggagaatacgtttatagtggggca
attacccatcaattagcctttacttattttccccaaaaagttttggataagacacaatta
acctatgattgtttacaaacattagctgtttttgatttatgggaaatcgaacgtgagcta
aatttattacaaacagatccggaaattttatggcgtccttttgctagtttatctggtggc
gagcagacaaaagtattattagctttattatttattgatgatcgtcactttccattaatc
gatgaacccacgaatcacttagatattacggctcgccaacaagtagcaaactatttaaaa
gcaaaaagaaatggttttattgtggtgagtcatgatcgtagttttgtcaatgagatcgtg
gaccacgttctttctattgaaaaaagtcaattggtattatatcaaggaaactttagtact
tatgaagaacaaaaagaacaacgcgatcactatgaacaggaagaaaaccgtaagttgaag
aaagaaattggtcgtctaaaacaaacggctgcggagaaagctgaatggtcacgcggcaga
gaaagagataaacaaggaaaccctaatcaaaaaggtagcggcgctatttatgatacggga
gctattggtgctcgtgcagcgcgcacgatgaaacgctctaaagctattgttaatcgtatg
gaagaaaaagctgaagaaaagaaaggtttattacatgatattgaagatgttgactcttta
acaataaactatcaaccctcttatcataagcaattacttaaagttgaaaaattgcaactt
agctatacagaacaaccgttgttttcccctatttcttttgaaattgaacaaggacagcgt
ttagcgattcaaggagcgaatggttcggggaaatcttccattattcagtttttgttagat
gaatttacaggagttgctagcgggaaggcaacctttgctcatgacttaagtataagttat
gtacggcaaaattatgaagataatactggaacgctgcaagaatttgctcaggcgcatcat
ttatcttatgaagaactattgaataatttgcataaattaggcgtggaacgcaaagtattt
gccaatcggattgaaaagatgagtttaggacaacgcaaacgagttgagttggctaagtca
ttagcgactccagcagagttgtttatttgggatgaaccattaaattatttagatgtgttt
aatcatgagcagttagaagctgttattcaaagtgtgcaaccgtctatgctagttgtagag
catgaggcgacttttttgaaaaatattgcaactaaaatgatttatttgtga
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