Tetragenococcus halophilus YJ1: GLW17_09050
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Entry
GLW17_09050 CDS
T06306
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tey
Tetragenococcus halophilus YJ1
Pathway
tey03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tey00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLW17_09050 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tey03019
]
GLW17_09050 (pnp)
03016 Transfer RNA biogenesis [BR:
tey03016
]
GLW17_09050 (pnp)
Enzymes [BR:
tey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GLW17_09050 (pnp)
Messenger RNA biogenesis [BR:
tey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GLW17_09050 (pnp)
Transfer RNA biogenesis [BR:
tey03016
]
Prokaryotic type
tRNA degradation factors
GLW17_09050 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
Cas_Cas1
S1_RRP5
SPATA25
S1_2
KH-I_KHDC4-BBP
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-ProteinID:
QGP76935
UniProt:
A0AB37D655
LinkDB
All DBs
Position
1905313..1907460
Genome browser
AA seq
715 aa
AA seq
DB search
MTKQVFETTWGGRPLQVEVGQLAKQANGAVLVRYGETVVLSTVVASKEAKGTDFFPLTIN
YEEKMYAVGKIPGGFIKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVTNTVMSVEQ
DCSPAMAAMLGSSLALSISDIPFEGPIAGVEVGRVNGEYILNPTVEQHESSDIDLTVAGT
SEAINMVESGAQEVTEADMLGALMFGQEAIQELVAFEEEVAASCGKEKMDISLLQVDEDL
QKAIYNNYYETMKTAVLTEEKLAREDEIENVKTIVKEAYEEQITALEEEASEHLAQEVNQ
IAEDLEKDVVRELITIDKIRPDGRKVDEIRALSSEVGLLPRAHGSGLFTRGQTQALSACT
LAPLGEHQVIDGLGVEESKRFIHHYNFPKYSVGSTGRAGSPGRREIGHGALGERALSQII
PSEAEFPYTIRLVAEVLESNGSSSQASICAGTLALMDAGVPIKAPVAGIAMGLVSDGEKY
TILTDIQGMEDHLGDMDFKVAGTKDGITALQMDIKIQGITEQILREALAQAKQARMEILQ
QLTSTIAQPKEELSPYAPKIEMMSIDPEKIKDVIGKGGDVINGIIDETGVKIDIDQEGNV
SIASSDAEMIKKASGIIKDLTKEIKPGEVYLGKVVRIEKFGAFVNIAKGKDGLVHISQIA
KERINKVEDVLHVGDEVLVKVTEIDKQGRINLSRKAMLKDDEKTDDKKDSKSTKE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaagtttttgaaacaacttggggaggacgtcctctacaagttgaagttgga
caattggccaaacaagcaaacggggctgttttagtacgttatggtgaaacagtagtatta
agtacagttgtagcttcaaaagaagctaagggaacagactttttcccattgactatcaat
tatgaagaaaaaatgtacgctgtaggaaagattccgggaggctttataaaaagagaaggt
cgtccgagtaccgatgcaacattaactgcgcgattaattgatcgtccgattcgcccaatg
tttgcagaaggtttccgtaatgaagtacaagtaacaaacacagttatgagtgtggaacaa
gattgttcgccggctatggcagctatgctaggttcttctttagcattgtcaatttctgac
atcccgtttgaaggtcctattgcgggtgtggaagttggacgtgtgaatggtgaatacatt
ttaaacccaacagtagaacaacatgaaagttcagatattgatttaaccgttgcaggtact
agtgaagcaatcaatatggtcgaatcaggtgctcaagaagtgactgaagcagatatgcta
ggcgctttgatgttcgggcaagaagcgatccaagaattggtagcttttgaagaagaagta
gccgcaagttgtggtaaagaaaaaatggatatttctttattacaagtagatgaagattta
caaaaagccatttataataattattatgaaaccatgaaaacggcggttttaacagaagaa
aaattagcacgtgaagatgaaattgaaaatgtaaaaacgattgttaaagaagcttatgaa
gaacaaatcacagcactagaagaagaagctagtgagcacctggctcaagaagtaaatcaa
attgctgaagacttagaaaaagatgtcgttcgtgaacttataaccattgacaaaatacgt
cctgatggtagaaaagttgatgaaattcgcgcgctttcttctgaagttggtttattacca
cgagctcatggctcaggattatttactcggggacaaacgcaagctttatcagcttgtaca
ttagcgcctttaggtgaacatcaagtaatcgatggtttaggtgtagaagaatctaaacgt
ttcattcaccactataatttccctaagtatagtgtaggttcaacggggcgtgcaggttct
ccaggtcgccgagaaattggtcacggtgcactaggtgaacgagctttgtcacaaattatt
ccaagtgaagcagaatttccttatactattcgtttagttgcagaagttttagaatctaat
ggttcttcttcacaagcaagtatttgtgccggaaccttagcattaatggatgcaggtgtt
cctattaaagcaccggttgctggtattgcgatgggacttgtatcagatggtgaaaaatac
acgattttgactgacattcaaggcatggaagaccacttaggagatatggactttaaagtt
gccggaacgaaagatggtatcactgctttacaaatggatatcaaaattcaaggaatcact
gaacaaatcctacgtgaagctttagctcaagctaaacaagcgcgaatggaaattttacaa
caattaacatcaacgattgctcaaccaaaagaagaattaagcccttatgcgccgaaaatc
gaaatgatgtctattgaccctgaaaagatcaaagatgttattggtaaaggcggcgacgtg
attaacggtattatagatgaaaccggcgttaaaattgacattgatcaagagggaaatgtg
tccattgcttcttcagacgctgaaatgattaaaaaagcaagtggaattattaaagacttg
accaaagaaatcaagccaggagaagtttatttaggaaaagttgttcgaattgaaaaattt
ggtgcttttgttaatattgctaaaggaaaagatggcttagttcatatttcgcaaattgca
aaggaacgtatcaataaagtagaagatgttcttcatgtaggcgacgaagtacttgtcaaa
gtaactgaaatagacaaacaagggcgcattaatctttcaagaaaagcaatgctaaaagat
gatgagaagactgatgataaaaaagatagtaaaagtactaaagaataa
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