Tetragenococcus halophilus YJ1: GLW17_09605
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Entry
GLW17_09605 CDS
T06306
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tey
Tetragenococcus halophilus YJ1
Brite
KEGG Orthology (KO) [BR:
tey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tey03400
]
GLW17_09605 (sbcD)
DNA repair and recombination proteins [BR:
tey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GLW17_09605 (sbcD)
Archaeal homologous recombinant proteins
GLW17_09605 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Thioredox_DsbH
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
QGP77538
UniProt:
A0A6I5YNM5
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All DBs
Position
2021713..2022849
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AA seq
378 aa
AA seq
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MRFLHTADWHIGKKLHGYDLLVDQKEIIHQILDIALTQQVDAIVIAGDLYDRSVPSVEAC
ELLNQTFIEMNLEKKLPILAISGNHDSAVRLSTGMPWYEQTDFHLYTDLKQSFEPVEIGD
VQFFLLPYFEPIAARLYFAEESLSLQAAIKKIIEKMRTAFDKNKKQVLVTHFFIAGSTRS
DSETAVEVGGLNRISYELVQDFDYVALGHLHSKNALKTKNAFYSGSPLKFSLSEKDDSKG
VWIVDSRSVAPEFHELVAKRDVCSLQASFEELTDPSFYQRMDRNCFWYFQLTDRSVITNM
MNQLRAIYPNILGVERVNGRRETKQLEKVQHRKNTPYSMLTSFFEDITGDRLTKKQRDWL
DEGLQQSLDTEKRNDDAT
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
ttgcgatttttacatacagccgattggcatatcggaaaaaaacttcatggttacgattta
ttagtcgatcaaaaagagatcattcatcagattttagatattgcacttacacagcaggtg
gacgccattgttattgcaggagatctgtatgatcgaagtgtccctagtgtagaagcctgc
gaattgcttaatcaaacttttattgagatgaatctagaaaaaaagctacctattttggct
atttccggcaatcatgattcggcggttcgcttaagtacgggcatgccatggtatgagcaa
actgattttcatctctatacagatttgaagcagtcttttgaaccagttgaaataggagat
gtacaattctttttactaccctattttgaacctattgcagcgcgtctttattttgcagaa
gaaagtttgtctttacaagctgctattaaaaaaatcatcgagaaaatgcggacagctttt
gataaaaataaaaaacaagtacttgtgacccattttttcattgctggcagtacgcgtagt
gattctgaaacagcagtggaagtgggcgggttaaatcgtatttcctatgaactggtgcaa
gattttgattatgtcgctctagggcatttgcattcaaaaaatgctttaaaaacaaaaaat
gctttttatagcggctcgccattaaaattttcattatccgaaaaagatgattcaaaaggc
gtatggatcgttgatagtcgatcagtagcccctgaatttcatgagctggtagctaaacga
gatgtttgtagtttacaagcttcttttgaagaactaactgatccaagcttttatcagcga
atggatcgtaattgtttttggtattttcagttaacagatcgtagtgtgattacaaatatg
atgaaccaattgcgtgcgatctatcctaatatattaggcgttgaacgagtcaatggacga
cgtgaaacaaaacaactagaaaaagtacaacatcgcaaaaatacgccttacagtatgttg
acttctttttttgaagatattacaggcgatcgtttaaccaaaaagcagcgggattggttg
gatgaaggattacaacaatcactggatacagaaaagaggaacgatgatgcaacctag
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